Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 AC236430.1-201ENST00000402231 743 ntBASIC16.85■□□□□ 0.29
CD248Q9HCU0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 AC073389.1-201ENST00000595595 795 ntBASIC16.85■□□□□ 0.29
CD248Q9HCU0 AP001350.2-201ENST00000625104 1094 ntBASIC16.85■□□□□ 0.29
CD248Q9HCU0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.84■□□□□ 0.29
CD248Q9HCU0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 FOXO1B-201ENST00000504678 1527 ntBASIC16.84■□□□□ 0.29
CD248Q9HCU0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 AC022532.1-201ENST00000624563 1728 ntBASIC16.84■□□□□ 0.29
CD248Q9HCU0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD248Q9HCU0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CD248Q9HCU0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.83■□□□□ 0.29
CD248Q9HCU0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CD248Q9HCU0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CD248Q9HCU0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CD248Q9HCU0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.83■□□□□ 0.29
CD248Q9HCU0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CD248Q9HCU0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD248Q9HCU0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD248Q9HCU0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD248Q9HCU0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD248Q9HCU0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD248Q9HCU0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD248Q9HCU0 TSPY16P-201ENST00000449843 468 ntBASIC16.83■□□□□ 0.28
CD248Q9HCU0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD248Q9HCU0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.83■□□□□ 0.28
CD248Q9HCU0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD248Q9HCU0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.83■□□□□ 0.28
CD248Q9HCU0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CD248Q9HCU0 MIR6080-201ENST00000617359 66 ntBASIC16.83■□□□□ 0.28
CD248Q9HCU0 AL390754.1-201ENST00000619088 582 ntBASIC16.83■□□□□ 0.28
CD248Q9HCU0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms