Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 KRT17P4-201ENST00000429445 819 ntBASIC14.48□□□□□ -0.09
CHD8Q9HCK8 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 AC005632.3-201ENST00000605544 308 ntBASIC14.48□□□□□ -0.09
CHD8Q9HCK8 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 AC009113.1-201ENST00000570267 2443 ntBASIC14.48□□□□□ -0.09
CHD8Q9HCK8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 ENPP7P8-202ENST00000527856 1345 ntBASIC14.47□□□□□ -0.09
CHD8Q9HCK8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 AC245100.5-201ENST00000452108 331 ntBASIC14.47□□□□□ -0.09
CHD8Q9HCK8 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 MIR4683-201ENST00000579659 81 ntBASIC14.47□□□□□ -0.09
CHD8Q9HCK8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 AL603756.1-201ENST00000606511 2163 ntBASIC14.47□□□□□ -0.09
CHD8Q9HCK8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 AC024293.1-201ENST00000467930 498 ntBASIC14.47□□□□□ -0.09
CHD8Q9HCK8 IGHEP1-201ENST00000521393 651 ntBASIC14.47□□□□□ -0.09
CHD8Q9HCK8 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHD8Q9HCK8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 LYPLA2P1-203ENST00000447689 696 ntBASIC14.46□□□□□ -0.09
CHD8Q9HCK8 CR392039.1-201ENST00000623217 204 ntBASIC14.46□□□□□ -0.09
CHD8Q9HCK8 AC025262.2-201ENST00000623975 1056 ntBASIC14.46□□□□□ -0.09
CHD8Q9HCK8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 AC020916.1-201ENST00000587762 1774 ntBASIC14.46□□□□□ -0.09
CHD8Q9HCK8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.46□□□□□ -0.09
CHD8Q9HCK8 POU5F1P2-201ENST00000521750 823 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms