RNA–Protein interactions for RNA: ENST00000372539.3

CLDN19-202, Transcript of claudin 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN19, Length 1,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN19-202ENST00000372539 NISCHQ9Y2I1 1504 aa37.47■■■■□ 3.59
CLDN19-202ENST00000372539 CCDC180Q9P1Z9 1646 aa32.88■■■□□ 2.85
CLDN19-202ENST00000372539 ZCCHC6Q5VYS8 1495 aaKnown RBP31.45■■■□□ 2.62
CLDN19-202ENST00000372539 ABCC9O60706 1549 aa31.31■■■□□ 2.6
CLDN19-202ENST00000372539 DCAF1Q9Y4B6 1507 aa31■■■□□ 2.55
CLDN19-202ENST00000372539 DCAF8L2P0C7V8 631 aa30.82■■■□□ 2.52
CLDN19-202ENST00000372539 MYO15BQ96JP2 1530 aa30.75■■■□□ 2.51
CLDN19-202ENST00000372539 NACADO15069 1562 aa30.63■■■□□ 2.49
CLDN19-202ENST00000372539 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
CLDN19-202ENST00000372539 SHROOM4Q9ULL8 1493 aa30.24■■■□□ 2.43
CLDN19-202ENST00000372539 SCRIBQ14160 1630 aa30.15■■■□□ 2.42
CLDN19-202ENST00000372539 UNC13AQ9UPW8 1703 aa29.95■■■□□ 2.38
CLDN19-202ENST00000372539 BICRAQ9NZM4 1560 aa29.65■■■□□ 2.34
CLDN19-202ENST00000372539 PABPN1Q86U42 306 aaKnown RBP eCLIP29.39■■■□□ 2.3
CLDN19-202ENST00000372539 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
CLDN19-202ENST00000372539 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
CLDN19-202ENST00000372539 BAZ1AQ9NRL2 1556 aaPredicted RBP28.93■■■□□ 2.22
CLDN19-202ENST00000372539 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
CLDN19-202ENST00000372539 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
CLDN19-202ENST00000372539 SUPT5HO00267 1087 aaKnown RBP28.84■■■□□ 2.21
CLDN19-202ENST00000372539 EIF4G1Q04637 1599 aaKnown RBP28.72■■■□□ 2.19
CLDN19-202ENST00000372539 WIZO95785 1651 aa28.71■■■□□ 2.19
CLDN19-202ENST00000372539 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
CLDN19-202ENST00000372539 ATAD2BQ9ULI0 1458 aa28.47■■■□□ 2.15
CLDN19-202ENST00000372539 SMARCA2P51531 1590 aa28.42■■■□□ 2.14
CLDN19-202ENST00000372539 TOP2AP11388 1531 aaKnown RBP28.39■■■□□ 2.13
CLDN19-202ENST00000372539 CC2D2AQ9P2K1 1620 aa28.37■■■□□ 2.13
CLDN19-202ENST00000372539 NCAPD3P42695 1498 aa28.28■■■□□ 2.12
CLDN19-202ENST00000372539 BAZ1BQ9UIG0 1483 aaKnown RBP28.26■■■□□ 2.11
CLDN19-202ENST00000372539 HMGXB3Q12766 1538 aa28.24■■■□□ 2.11
CLDN19-202ENST00000372539 CCDC88BA6NC98 1476 aa28.07■■■□□ 2.08
CLDN19-202ENST00000372539 DNAJC5BQ9UF47 199 aa27.94■■■□□ 2.06
CLDN19-202ENST00000372539 CFTRP13569 1480 aa27.56■■■□□ 2
CLDN19-202ENST00000372539 CHIC1Q5VXU3 224 aa27.52■■■□□ 2
CLDN19-202ENST00000372539 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
CLDN19-202ENST00000372539 PRDM2Q13029 1718 aa27.47■■□□□ 1.99
CLDN19-202ENST00000372539 NESP48681 1621 aa27.43■■□□□ 1.98
CLDN19-202ENST00000372539 ABCC8Q09428 1581 aa27.4■■□□□ 1.98
CLDN19-202ENST00000372539 LAMC3Q9Y6N6 1575 aa27.37■■□□□ 1.97
CLDN19-202ENST00000372539 FANCD2Q9BXW9 1451 aa27.21■■□□□ 1.95
CLDN19-202ENST00000372539 SYNJ1O43426 1573 aa27.2■■□□□ 1.94
CLDN19-202ENST00000372539 WRNQ14191 1432 aaPredicted RBP eCLIP27.19■■□□□ 1.94
CLDN19-202ENST00000372539 KIF21AQ7Z4S6 1674 aa27.13■■□□□ 1.93
CLDN19-202ENST00000372539 TRIM41Q8WV44 630 aa27.13■■□□□ 1.93
CLDN19-202ENST00000372539 CUX1P39880 1505 aa27.1■■□□□ 1.93
CLDN19-202ENST00000372539 BIVM-ERCC5R4GMW8 1640 aa27.09■■□□□ 1.93
CLDN19-202ENST00000372539 PDS5BQ9NTI5 1447 aa27.09■■□□□ 1.93
CLDN19-202ENST00000372539 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
CLDN19-202ENST00000372539 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
CLDN19-202ENST00000372539 URB2Q14146 1524 aaKnown RBP26.94■■□□□ 1.9
CLDN19-202ENST00000372539 DNMBPQ6XZF7 1577 aa26.94■■□□□ 1.9
CLDN19-202ENST00000372539 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
CLDN19-202ENST00000372539 MRC2Q9UBG0 1479 aa26.84■■□□□ 1.89
CLDN19-202ENST00000372539 FGD5Q6ZNL6 1462 aa26.82■■□□□ 1.88
CLDN19-202ENST00000372539 THOC2Q8NI27 1593 aaKnown RBP26.8■■□□□ 1.88
CLDN19-202ENST00000372539 ERCC6Q03468 1493 aa26.8■■□□□ 1.88
CLDN19-202ENST00000372539 SOGA1O94964 1423 aa26.78■■□□□ 1.88
CLDN19-202ENST00000372539 WDR62O43379 1518 aa26.75■■□□□ 1.87
CLDN19-202ENST00000372539 POLA1P09884 1462 aaPredicted RBP26.75■■□□□ 1.87
CLDN19-202ENST00000372539 RUSC2Q8N2Y8 1516 aa26.74■■□□□ 1.87
CLDN19-202ENST00000372539 RAD54L2Q9Y4B4 1467 aa26.65■■□□□ 1.86
CLDN19-202ENST00000372539 FAM9AQ8IZU1 332 aaPredicted RBP26.64■■□□□ 1.86
CLDN19-202ENST00000372539 WDR97A6NE52 1622 aa26.63■■□□□ 1.85
CLDN19-202ENST00000372539 CUX2O14529 1486 aa26.6■■□□□ 1.85
CLDN19-202ENST00000372539 EEA1Q15075 1411 aa26.59■■□□□ 1.85
CLDN19-202ENST00000372539 TARBP1Q13395 1621 aaKnown RBP26.59■■□□□ 1.85
CLDN19-202ENST00000372539 ABCA10Q8WWZ4 1543 aa26.58■■□□□ 1.85
CLDN19-202ENST00000372539 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
CLDN19-202ENST00000372539 ABCA5Q8WWZ7 1642 aa26.45■■□□□ 1.83
CLDN19-202ENST00000372539 CSRNP3Q8WYN3 585 aa26.44■■□□□ 1.82
CLDN19-202ENST00000372539 IFT140Q96RY7 1462 aa26.43■■□□□ 1.82
CLDN19-202ENST00000372539 LOC105371045A0A1W2PR82 267 aa26.42■■□□□ 1.82
CLDN19-202ENST00000372539 TDRD9Q8NDG6 1382 aaKnown RBP26.37■■□□□ 1.81
CLDN19-202ENST00000372539 KIF21BO75037 1637 aa26.36■■□□□ 1.81
CLDN19-202ENST00000372539 ZNF608Q9ULD9 1512 aaPredicted RBP26.36■■□□□ 1.81
CLDN19-202ENST00000372539 IGF1RP08069 1367 aa26.34■■□□□ 1.81
CLDN19-202ENST00000372539 GAPVD1Q14C86 1478 aa26.32■■□□□ 1.8
CLDN19-202ENST00000372539 PRXQ9BXM0 1461 aa26.32■■□□□ 1.8
CLDN19-202ENST00000372539 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
CLDN19-202ENST00000372539 AQRO60306 1485 aaKnown RBP eCLIP26.28■■□□□ 1.8
CLDN19-202ENST00000372539 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
CLDN19-202ENST00000372539 EHMT2Q96KQ7 1210 aa26.26■■□□□ 1.79
CLDN19-202ENST00000372539 RAPGEF2Q9Y4G8 1499 aa26.25■■□□□ 1.79
CLDN19-202ENST00000372539 ERICH3Q5RHP9 1530 aa26.25■■□□□ 1.79
CLDN19-202ENST00000372539 GOLGA3Q08378 1498 aa26.23■■□□□ 1.79
CLDN19-202ENST00000372539 CUL7Q14999 1698 aa26.21■■□□□ 1.79
CLDN19-202ENST00000372539 CARMIL1Q5VZK9 1371 aa26.16■■□□□ 1.78
CLDN19-202ENST00000372539 GRIN2BQ13224 1484 aa26.16■■□□□ 1.78
CLDN19-202ENST00000372539 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
CLDN19-202ENST00000372539 TNIKQ9UKE5 1360 aa26.07■■□□□ 1.76
CLDN19-202ENST00000372539 SNAPC4Q5SXM2 1469 aa26.06■■□□□ 1.76
CLDN19-202ENST00000372539 FHAD1B1AJZ9 1412 aa26.02■■□□□ 1.76
CLDN19-202ENST00000372539 UBTFP17480 764 aaKnown RBP26■■□□□ 1.75
CLDN19-202ENST00000372539 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
CLDN19-202ENST00000372539 CEP162Q5TB80 1403 aa25.93■■□□□ 1.74
CLDN19-202ENST00000372539 CTTNBP2Q8WZ74 1663 aa25.9■■□□□ 1.74
CLDN19-202ENST00000372539 SYNJ2O15056 1496 aa25.89■■□□□ 1.74
CLDN19-202ENST00000372539 GRIN2AQ12879 1464 aa25.87■■□□□ 1.73
CLDN19-202ENST00000372539 CHD1O14646 1710 aa25.79■■□□□ 1.72
CLDN19-202ENST00000372539 CLIP1P30622 1438 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 292.9 ms