Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 FAM185BP-201ENST00000443595 716 ntBASIC14.01□□□□□ -0.17
ELL3Q9HB65 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 KRT18P2-201ENST00000447938 1258 ntBASIC14.01□□□□□ -0.17
ELL3Q9HB65 CXCL1P1-201ENST00000502804 216 ntBASIC14.01□□□□□ -0.17
ELL3Q9HB65 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14□□□□□ -0.17
ELL3Q9HB65 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ELL3Q9HB65 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14□□□□□ -0.17
ELL3Q9HB65 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14□□□□□ -0.17
ELL3Q9HB65 HLA-DQB2-231ENST00000435145 2026 ntBASIC14□□□□□ -0.17
ELL3Q9HB65 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 AC112504.1-201ENST00000623415 1841 ntBASIC14□□□□□ -0.17
ELL3Q9HB65 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 POLD2P1-201ENST00000511220 997 ntBASIC14□□□□□ -0.17
ELL3Q9HB65 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
ELL3Q9HB65 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14□□□□□ -0.17
ELL3Q9HB65 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14□□□□□ -0.17
ELL3Q9HB65 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14□□□□□ -0.17
ELL3Q9HB65 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14□□□□□ -0.17
ELL3Q9HB65 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14□□□□□ -0.17
ELL3Q9HB65 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
ELL3Q9HB65 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14□□□□□ -0.17
ELL3Q9HB65 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14□□□□□ -0.17
ELL3Q9HB65 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ELL3Q9HB65 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.99□□□□□ -0.17
ELL3Q9HB65 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.99□□□□□ -0.17
ELL3Q9HB65 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.99□□□□□ -0.17
ELL3Q9HB65 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ELL3Q9HB65 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 AC069224.1-201ENST00000566372 1715 ntBASIC13.99□□□□□ -0.17
ELL3Q9HB65 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ELL3Q9HB65 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ELL3Q9HB65 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.99□□□□□ -0.17
ELL3Q9HB65 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ELL3Q9HB65 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ELL3Q9HB65 RNU1-129P-201ENST00000384064 167 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms