Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 POR-202ENST00000412064 1044 ntTSL 515.98■□□□□ 0.157e-6■□□□□ 9.4
XRN2Q9H0D6 XYLB-204ENST00000472721 546 ntTSL 415.79■□□□□ 0.127e-6■□□□□ 9.4
XRN2Q9H0D6 TCF3-209ENST00000586410 288 ntTSL 515.77■□□□□ 0.127e-6■□□□□ 9.4
XRN2Q9H0D6 HSF1-213ENST00000534314 684 ntTSL 215.73■□□□□ 0.117e-6■□□□□ 9.4
XRN2Q9H0D6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.117e-6■□□□□ 9.4
XRN2Q9H0D6 POR-217ENST00000460892 603 ntTSL 215.64■□□□□ 0.097e-6■□□□□ 9.4
XRN2Q9H0D6 TOM1-203ENST00000404284 2622 ntTSL 215.52■□□□□ 0.087e-6■□□□□ 9.4
XRN2Q9H0D6 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC15.17■□□□□ 0.027e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.97□□□□□ -0.017e-6■□□□□ 9.4
XRN2Q9H0D6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.059e-13■□□□□ 9.4
XRN2Q9H0D6 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC14.55□□□□□ -0.087e-6■□□□□ 9.4
XRN2Q9H0D6 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.087e-6■□□□□ 9.4
XRN2Q9H0D6 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.52□□□□□ -0.097e-6■□□□□ 9.4
XRN2Q9H0D6 NOP58-205ENST00000472050 582 ntTSL 314.08□□□□□ -0.167e-6■□□□□ 9.4
XRN2Q9H0D6 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.86□□□□□ -0.197e-6■□□□□ 9.4
XRN2Q9H0D6 TRIB1-202ENST00000519576 1409 ntTSL 1 (best) BASIC13.56□□□□□ -0.247e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-241ENST00000552915 1071 ntTSL 513.44□□□□□ -0.267e-6■□□□□ 9.4
XRN2Q9H0D6 NOP58-204ENST00000467734 638 ntTSL 513.13□□□□□ -0.317e-6■□□□□ 9.4
XRN2Q9H0D6 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.327e-6■□□□□ 9.4
XRN2Q9H0D6 TBC1D14-204ENST00000439515 602 ntTSL 512.92□□□□□ -0.347e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-223ENST00000550160 993 ntTSL 512.89□□□□□ -0.357e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-239ENST00000552483 895 ntTSL 512.66□□□□□ -0.387e-6■□□□□ 9.4
XRN2Q9H0D6 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.417e-6■□□□□ 9.4
XRN2Q9H0D6 WNK4-204ENST00000591448 3909 ntTSL 1 (best)12.27□□□□□ -0.447e-6■□□□□ 9.4
XRN2Q9H0D6 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.457e-6■□□□□ 9.4
XRN2Q9H0D6 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.457e-6■□□□□ 9.4
XRN2Q9H0D6 MRPL52-205ENST00000432849 411 ntTSL 2 BASIC12.11□□□□□ -0.477e-6■□□□□ 9.4
XRN2Q9H0D6 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC12.03□□□□□ -0.487e-6■□□□□ 9.4
XRN2Q9H0D6 MRPL52-204ENST00000397505 333 ntTSL 5 BASIC11.77□□□□□ -0.537e-6■□□□□ 9.4
XRN2Q9H0D6 LINC02008-202ENST00000494340 524 ntTSL 211.72□□□□□ -0.537e-6■□□□□ 9.4
XRN2Q9H0D6 WNK4-201ENST00000246914 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.577e-6■□□□□ 9.4
XRN2Q9H0D6 ANAPC16-201ENST00000299381 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.587e-6■□□□□ 9.4
XRN2Q9H0D6 BST2-203ENST00000533098 459 ntTSL 211.38□□□□□ -0.597e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-201ENST00000229195 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.597e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-214ENST00000548741 536 ntTSL 411.15□□□□□ -0.627e-6■□□□□ 9.4
XRN2Q9H0D6 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.657e-6■□□□□ 9.4
XRN2Q9H0D6 ANAPC16-205ENST00000621663 3567 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.657e-6■□□□□ 9.4
XRN2Q9H0D6 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.677e-6■□□□□ 9.4
XRN2Q9H0D6 YARS-210ENST00000616261 1167 ntTSL 5 BASIC10.83□□□□□ -0.687e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.697e-6■□□□□ 9.4
XRN2Q9H0D6 TBC1D14-207ENST00000448507 4887 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.717e-6■□□□□ 9.4
XRN2Q9H0D6 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC10.56□□□□□ -0.727e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-205ENST00000547321 577 ntTSL 210.52□□□□□ -0.737e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-228ENST00000551132 618 ntTSL 310.52□□□□□ -0.737e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-229ENST00000551179 355 ntTSL 210.52□□□□□ -0.737e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-242ENST00000553020 576 ntTSL 510.52□□□□□ -0.737e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-243ENST00000553078 440 ntTSL 310.52□□□□□ -0.737e-6■□□□□ 9.4
XRN2Q9H0D6 NFATC3-204ENST00000379165 3583 ntTSL 29.74□□□□□ -0.857e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-232ENST00000551661 571 ntTSL 49.64□□□□□ -0.877e-6■□□□□ 9.4
XRN2Q9H0D6 PUM1-223ENST00000532678 793 ntTSL 49.63□□□□□ -0.877e-6■□□□□ 9.4
XRN2Q9H0D6 TBC1D14-202ENST00000410031 4201 ntTSL 5 BASIC9.57□□□□□ -0.887e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-225ENST00000550641 964 ntTSL 59.51□□□□□ -0.897e-6■□□□□ 9.4
XRN2Q9H0D6 YARS-204ENST00000470377 782 ntTSL 39.5□□□□□ -0.897e-6■□□□□ 9.4
XRN2Q9H0D6 CFB-277ENST00000467360 1082 ntTSL 59.45□□□□□ -0.97e-6■□□□□ 9.4
XRN2Q9H0D6 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC9.13□□□□□ -0.957e-6■□□□□ 9.4
XRN2Q9H0D6 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC8.94□□□□□ -0.987e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-208ENST00000548021 724 ntTSL 28.79□□□□□ -17e-6■□□□□ 9.4
XRN2Q9H0D6 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.027e-6■□□□□ 9.4
XRN2Q9H0D6 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.037e-6■□□□□ 9.4
XRN2Q9H0D6 CFB-282ENST00000483004 940 ntTSL 58.58□□□□□ -1.047e-6■□□□□ 9.4
XRN2Q9H0D6 MRPL52-214ENST00000556654 362 ntTSL 38.54□□□□□ -1.047e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-217ENST00000549443 457 ntTSL 48.36□□□□□ -1.077e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-237ENST00000552319 783 ntTSL 58.36□□□□□ -1.077e-6■□□□□ 9.4
XRN2Q9H0D6 PUM1-218ENST00000526215 586 ntTSL 28.09□□□□□ -1.117e-6■□□□□ 9.4
XRN2Q9H0D6 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.06□□□□□ -1.127e-6■□□□□ 9.4
XRN2Q9H0D6 PUM1-214ENST00000525843 4528 ntTSL 57.69□□□□□ -1.187e-6■□□□□ 9.4
XRN2Q9H0D6 CNOT2-238ENST00000552422 443 ntTSL 37.67□□□□□ -1.187e-6■□□□□ 9.4
XRN2Q9H0D6 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.27e-6■□□□□ 9.4
XRN2Q9H0D6 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.217e-6■□□□□ 9.4
XRN2Q9H0D6 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.44□□□□□ -1.227e-6■□□□□ 9.4
XRN2Q9H0D6 RALY-209ENST00000489384 227 ntTSL 37.36□□□□□ -1.237e-6■□□□□ 9.4
XRN2Q9H0D6 PUM1-211ENST00000498419 3068 ntTSL 56.98□□□□□ -1.297e-6■□□□□ 9.4
XRN2Q9H0D6 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.87□□□□□ -1.317e-6■□□□□ 9.4
XRN2Q9H0D6 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.86□□□□□ -1.317e-6■□□□□ 9.4
XRN2Q9H0D6 WNK4-203ENST00000587745 188 ntTSL 54.57□□□□□ -1.687e-6■□□□□ 9.4
XRN2Q9H0D6 AXIN2-206ENST00000580513 1060 ntTSL 229.52■■■□□ 2.322e-9■□□□□ 9.4
XRN2Q9H0D6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.62■□□□□ 0.732e-6■□□□□ 9.3
XRN2Q9H0D6 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.383e-6■□□□□ 9.3
XRN2Q9H0D6 TCF25-210ENST00000563484 468 ntTSL 213.81□□□□□ -0.21e-9■□□□□ 9.3
XRN2Q9H0D6 EPS8L2-211ENST00000527832 1597 ntTSL 224.48■■□□□ 1.515e-15■□□□□ 9.3
XRN2Q9H0D6 STAG3L5P-PVRIG2P-PILRB-203ENST00000470714 868 ntTSL 319.24■□□□□ 0.673e-6■□□□□ 9.3
XRN2Q9H0D6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.2■□□□□ 0.53e-6■□□□□ 9.3
XRN2Q9H0D6 STAG3L5P-PVRIG2P-PILRB-205ENST00000483329 819 ntTSL 514.57□□□□□ -0.083e-6■□□□□ 9.3
XRN2Q9H0D6 NECAB3-217ENST00000606106 591 ntTSL 423.15■■□□□ 1.31e-7■□□□□ 9.3
XRN2Q9H0D6 EME2-202ENST00000561903 4586 ntTSL 214.21□□□□□ -0.141e-7■□□□□ 9.3
XRN2Q9H0D6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.652e-7■□□□□ 9.3
XRN2Q9H0D6 FADS1-208ENST00000473263 574 ntTSL 424.77■■□□□ 1.562e-7■□□□□ 9.3
XRN2Q9H0D6 FADS1-218ENST00000544696 567 ntTSL 323.06■■□□□ 1.282e-7■□□□□ 9.3
XRN2Q9H0D6 FADS1-217ENST00000544309 581 ntTSL 322.04■■□□□ 1.122e-7■□□□□ 9.3
XRN2Q9H0D6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.32■□□□□ 0.842e-7■□□□□ 9.3
XRN2Q9H0D6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.32■□□□□ 0.842e-7■□□□□ 9.3
XRN2Q9H0D6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.662e-7■□□□□ 9.3
XRN2Q9H0D6 FADS1-202ENST00000421879 583 ntTSL 318.73■□□□□ 0.592e-7■□□□□ 9.3
XRN2Q9H0D6 PYCR2-202ENST00000446534 1341 ntTSL 217.97■□□□□ 0.472e-7■□□□□ 9.3
XRN2Q9H0D6 FADS1-215ENST00000541683 1844 ntTSL 217.87■□□□□ 0.452e-7■□□□□ 9.3
XRN2Q9H0D6 FADS1-207ENST00000466716 640 ntTSL 517.69■□□□□ 0.422e-7■□□□□ 9.3
XRN2Q9H0D6 SRSF7-203ENST00000415527 1135 ntTSL 517.51■□□□□ 0.399e-10■□□□□ 9.3
XRN2Q9H0D6 FADS1-203ENST00000424501 926 ntTSL 315.98■□□□□ 0.152e-7■□□□□ 9.3
XRN2Q9H0D6 FADS1-209ENST00000491310 525 ntTSL 515.68■□□□□ 0.12e-7■□□□□ 9.3
XRN2Q9H0D6 MSN-206ENST00000609672 568 ntTSL 415.18■□□□□ 0.022e-7■□□□□ 9.3
Retrieved 100 of 21,068 protein–RNA pairs in 322.6 ms