Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 AC233702.3-201ENST00000578656 1387 ntBASIC12.22□□□□□ -0.45
SMIM12Q96EX1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 AC106881.1-201ENST00000605849 3329 ntBASIC12.22□□□□□ -0.45
SMIM12Q96EX1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 NTF6B-201ENST00000591913 560 ntBASIC12.22□□□□□ -0.45
SMIM12Q96EX1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.22□□□□□ -0.45
SMIM12Q96EX1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 AGAP7P-201ENST00000582299 2062 ntBASIC12.22□□□□□ -0.45
SMIM12Q96EX1 AGAP14-201ENST00000624701 2060 ntBASIC12.22□□□□□ -0.45
SMIM12Q96EX1 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SMIM12Q96EX1 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 KRT8P44-201ENST00000441609 1350 ntBASIC12.21□□□□□ -0.45
SMIM12Q96EX1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 AC007686.3-201ENST00000619017 3487 ntBASIC12.21□□□□□ -0.45
SMIM12Q96EX1 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 TERF1P1-201ENST00000311003 1181 ntBASIC12.21□□□□□ -0.45
SMIM12Q96EX1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.21□□□□□ -0.45
SMIM12Q96EX1 AC005363.2-201ENST00000618631 242 ntBASIC12.21□□□□□ -0.45
SMIM12Q96EX1 AL022326.1-202ENST00000641533 845 ntBASIC12.21□□□□□ -0.45
SMIM12Q96EX1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SMIM12Q96EX1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms