Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
MMP2P08253 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.99■□□□□ 0.15
MMP2P08253 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
MMP2P08253 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
MMP2P08253 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.99■□□□□ 0.15
MMP2P08253 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.99■□□□□ 0.15
MMP2P08253 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
MMP2P08253 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 AC127383.1-201ENST00000444697 1800 ntBASIC15.99■□□□□ 0.15
MMP2P08253 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.99■□□□□ 0.15
MMP2P08253 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.99■□□□□ 0.15
MMP2P08253 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.99■□□□□ 0.15
MMP2P08253 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.99■□□□□ 0.15
MMP2P08253 KRT18P64-201ENST00000434946 1219 ntBASIC15.99■□□□□ 0.15
MMP2P08253 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.99■□□□□ 0.15
MMP2P08253 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
MMP2P08253 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.99■□□□□ 0.15
MMP2P08253 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.99■□□□□ 0.15
MMP2P08253 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.99■□□□□ 0.15
MMP2P08253 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.99■□□□□ 0.15
MMP2P08253 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
MMP2P08253 LINC01115-203ENST00000606068 577 ntBASIC15.99■□□□□ 0.15
MMP2P08253 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
MMP2P08253 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
MMP2P08253 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.99■□□□□ 0.15
MMP2P08253 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.99■□□□□ 0.15
MMP2P08253 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MMP2P08253 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MMP2P08253 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
MMP2P08253 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
MMP2P08253 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.98■□□□□ 0.15
MMP2P08253 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
MMP2P08253 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
MMP2P08253 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.98■□□□□ 0.15
MMP2P08253 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.98■□□□□ 0.15
MMP2P08253 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.98■□□□□ 0.15
MMP2P08253 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.98■□□□□ 0.15
MMP2P08253 RPL13P2-201ENST00000440687 659 ntBASIC15.98■□□□□ 0.15
MMP2P08253 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.98■□□□□ 0.15
MMP2P08253 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.98■□□□□ 0.15
MMP2P08253 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.98■□□□□ 0.15
MMP2P08253 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.98■□□□□ 0.15
MMP2P08253 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.98■□□□□ 0.15
MMP2P08253 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.98■□□□□ 0.15
MMP2P08253 AC136621.1-201ENST00000624017 2304 ntBASIC15.98■□□□□ 0.15
MMP2P08253 AF228730.6-201ENST00000641497 218 ntBASIC15.98■□□□□ 0.15
MMP2P08253 AC084121.3-201ENST00000641716 218 ntBASIC15.98■□□□□ 0.15
MMP2P08253 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MMP2P08253 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.98■□□□□ 0.15
MMP2P08253 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MMP2P08253 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
MMP2P08253 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MMP2P08253 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.97■□□□□ 0.15
MMP2P08253 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP2P08253 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.97■□□□□ 0.15
MMP2P08253 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MMP2P08253 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.97■□□□□ 0.15
MMP2P08253 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP2P08253 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP2P08253 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MMP2P08253 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
MMP2P08253 SSR4P1-203ENST00000599569 2260 ntBASIC15.97■□□□□ 0.15
MMP2P08253 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.97■□□□□ 0.15
MMP2P08253 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.97■□□□□ 0.15
MMP2P08253 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP2P08253 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP2P08253 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.97■□□□□ 0.15
MMP2P08253 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms