Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 AC074338.1-201ENST00000416825 156 ntBASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 BASP1P1-201ENST00000430708 665 ntBASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 AC044860.1-202ENST00000559481 777 ntBASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 CICP13-201ENST00000422015 2789 ntBASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHA4Q9UN74 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 SDHAP3-202ENST00000515467 728 ntBASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 AC009407.1-201ENST00000568958 598 ntBASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHA4Q9UN74 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 AC132872.4-202ENST00000622924 2756 ntBASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 AL109936.8-201ENST00000641772 604 ntBASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms