Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC005332.3-201ENST00000589904 676 ntBASIC13.01□□□□□ -0.33
NKX6-2Q9C056 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 KRT17P2-201ENST00000300992 1314 ntBASIC13.01□□□□□ -0.33
NKX6-2Q9C056 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 BX640514.1-201ENST00000583223 1918 ntBASIC13.01□□□□□ -0.33
NKX6-2Q9C056 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 AC073869.1-201ENST00000415574 2762 ntBASIC13.01□□□□□ -0.33
NKX6-2Q9C056 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-2Q9C056 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-2Q9C056 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NKX6-2Q9C056 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
NKX6-2Q9C056 PC-204ENST00000524491 1714 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-2Q9C056 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-2Q9C056 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 AL353593.2-201ENST00000602529 1483 ntBASIC13□□□□□ -0.33
NKX6-2Q9C056 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-2Q9C056 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-2Q9C056 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-2Q9C056 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
NKX6-2Q9C056 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-2Q9C056 AC140113.3-201ENST00000605663 199 ntBASIC13□□□□□ -0.33
NKX6-2Q9C056 AC141257.4-201ENST00000634557 245 ntBASIC13□□□□□ -0.33
NKX6-2Q9C056 AC136944.6-201ENST00000634818 245 ntBASIC13□□□□□ -0.33
NKX6-2Q9C056 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-2Q9C056 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-2Q9C056 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NKX6-2Q9C056 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NKX6-2Q9C056 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13□□□□□ -0.33
NKX6-2Q9C056 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
NKX6-2Q9C056 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NKX6-2Q9C056 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-2Q9C056 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-2Q9C056 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NKX6-2Q9C056 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NKX6-2Q9C056 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13□□□□□ -0.33
NKX6-2Q9C056 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NKX6-2Q9C056 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NKX6-2Q9C056 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NKX6-2Q9C056 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 KRT8P10-201ENST00000450021 1447 ntBASIC12.99□□□□□ -0.33
NKX6-2Q9C056 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms