Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.89■□□□□ 0.3
PCK1P35558 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.89■□□□□ 0.3
PCK1P35558 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.89■□□□□ 0.3
PCK1P35558 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCK1P35558 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCK1P35558 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCK1P35558 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
PCK1P35558 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.89■□□□□ 0.29
PCK1P35558 AC099063.4-201ENST00000641099 1602 ntBASIC16.89■□□□□ 0.29
PCK1P35558 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.89■□□□□ 0.29
PCK1P35558 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.89■□□□□ 0.29
PCK1P35558 FAM220BP-201ENST00000377689 816 ntBASIC16.89■□□□□ 0.29
PCK1P35558 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.89■□□□□ 0.29
PCK1P35558 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.89■□□□□ 0.29
PCK1P35558 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCK1P35558 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.89■□□□□ 0.29
PCK1P35558 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.89■□□□□ 0.29
PCK1P35558 ALG1L5P-201ENST00000482043 771 ntBASIC16.89■□□□□ 0.29
PCK1P35558 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.89■□□□□ 0.29
PCK1P35558 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.89■□□□□ 0.29
PCK1P35558 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.89■□□□□ 0.29
PCK1P35558 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.89■□□□□ 0.29
PCK1P35558 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.89■□□□□ 0.29
PCK1P35558 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.89■□□□□ 0.29
PCK1P35558 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCK1P35558 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.89■□□□□ 0.29
PCK1P35558 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PCK1P35558 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.89■□□□□ 0.29
PCK1P35558 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.89■□□□□ 0.29
PCK1P35558 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.89■□□□□ 0.29
PCK1P35558 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCK1P35558 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCK1P35558 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.88■□□□□ 0.29
PCK1P35558 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.88■□□□□ 0.29
PCK1P35558 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 ELL2P1-201ENST00000413990 1906 ntBASIC16.88■□□□□ 0.29
PCK1P35558 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PCK1P35558 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.88■□□□□ 0.29
PCK1P35558 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.88■□□□□ 0.29
PCK1P35558 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.88■□□□□ 0.29
PCK1P35558 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.88■□□□□ 0.29
PCK1P35558 DNAJB3-201ENST00000446806 729 ntBASIC16.88■□□□□ 0.29
PCK1P35558 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCK1P35558 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.88■□□□□ 0.29
PCK1P35558 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.88■□□□□ 0.29
PCK1P35558 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.88■□□□□ 0.29
PCK1P35558 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.88■□□□□ 0.29
PCK1P35558 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PCK1P35558 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCK1P35558 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCK1P35558 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCK1P35558 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
PCK1P35558 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCK1P35558 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCK1P35558 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms