Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 TMC6-211ENST00000589271 1099 ntTSL 517■□□□□ 0.311e-8■■□□□ 11.9
RPS3P23396 TMC6-205ENST00000586126 821 ntTSL 316.06■□□□□ 0.161e-8■■□□□ 11.9
RPS3P23396 TMC6-223ENST00000592594 551 ntTSL 415.9■□□□□ 0.141e-8■■□□□ 11.9
RPS3P23396 TMC6-207ENST00000586697 571 ntTSL 414.41□□□□□ -0.11e-8■■□□□ 11.9
RPS3P23396 TMC6-221ENST00000592063 743 ntTSL 513.51□□□□□ -0.251e-8■■□□□ 11.9
RPS3P23396 SMLR1-201ENST00000541421 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.787e-11■■□□□ 11.9
RPS3P23396 FGG-209ENST00000465913 1573 ntTSL 26.72□□□□□ -1.331e-17■■□□□ 11.9
RPS3P23396 ERBB2-211ENST00000582648 1013 ntTSL 517.51■□□□□ 0.392e-7■■□□□ 11.9
RPS3P23396 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.24■□□□□ 0.352e-7■■□□□ 11.9
RPS3P23396 ERBB2-212ENST00000582788 2004 ntTSL 516.87■□□□□ 0.292e-7■■□□□ 11.9
RPS3P23396 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.531e-7■■□□□ 11.9
RPS3P23396 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.261e-7■■□□□ 11.9
RPS3P23396 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.261e-7■■□□□ 11.9
RPS3P23396 A2M-209ENST00000539638 590 ntTSL 44.95□□□□□ -1.626e-61■■□□□ 11.9
RPS3P23396 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.05□□□□□ -1.64e-7■■□□□ 11.9
RPS3P23396 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.634e-7■■□□□ 11.9
RPS3P23396 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.51□□□□□ -1.854e-7■■□□□ 11.9
RPS3P23396 RACK1-221ENST00000509148 888 ntTSL 29.61□□□□□ -0.872e-33■■□□□ 11.9
RPS3P23396 DDX5-205ENST00000577922 996 ntTSL 519.09■□□□□ 0.653e-14■■□□□ 11.9
RPS3P23396 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC11.99□□□□□ -0.494e-11■■□□□ 11.9
RPS3P23396 CIDEB-206ENST00000556756 248 ntTSL 59.5□□□□□ -0.891e-6■■□□□ 11.9
RPS3P23396 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.492e-7■■□□□ 11.9
RPS3P23396 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.86■□□□□ 0.451e-9■■□□□ 11.9
RPS3P23396 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.41■□□□□ 0.062e-7■■□□□ 11.9
RPS3P23396 CALM3-205ENST00000486500 2536 ntTSL 212.36□□□□□ -0.432e-7■■□□□ 11.9
RPS3P23396 CALM3-207ENST00000595072 721 ntTSL 210.92□□□□□ -0.662e-7■■□□□ 11.9
RPS3P23396 CALM3-204ENST00000482455 650 ntTSL 47.37□□□□□ -1.232e-7■■□□□ 11.9
RPS3P23396 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.646e-6■■□□□ 11.9
RPS3P23396 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.856e-6■■□□□ 11.9
RPS3P23396 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.866e-6■■□□□ 11.9
RPS3P23396 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.046e-6■■□□□ 11.9
RPS3P23396 M6PR-208ENST00000543258 561 ntTSL 59.95□□□□□ -0.821e-6■■□□□ 11.9
RPS3P23396 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.556e-7■■□□□ 11.9
RPS3P23396 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.366e-7■■□□□ 11.9
RPS3P23396 GNAS-229ENST00000470512 913 ntTSL 524.32■■□□□ 1.481e-13■■□□□ 11.9
RPS3P23396 GNAS-233ENST00000476935 828 ntTSL 322.98■■□□□ 1.271e-13■■□□□ 11.9
RPS3P23396 GNAS-239ENST00000481039 756 ntTSL 510.53□□□□□ -0.721e-13■■□□□ 11.9
RPS3P23396 GNAS-251ENST00000492907 790 ntTSL 37.64□□□□□ -1.191e-13■■□□□ 11.9
RPS3P23396 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.219e-7■■□□□ 11.9
RPS3P23396 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.63□□□□□ -0.079e-7■■□□□ 11.9
RPS3P23396 PSME1-209ENST00000561142 865 ntTSL 512.76□□□□□ -0.373e-9■■□□□ 11.9
RPS3P23396 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.76□□□□□ -0.212e-6■■□□□ 11.9
RPS3P23396 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.163e-7■■□□□ 11.9
RPS3P23396 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.963e-7■■□□□ 11.9
RPS3P23396 NOMO1-202ENST00000565655 666 ntTSL 310.59□□□□□ -0.719e-7■■□□□ 11.9
RPS3P23396 SARS-204ENST00000471705 851 ntTSL 27□□□□□ -1.293e-14■■□□□ 11.9
RPS3P23396 ACAA1-212ENST00000460424 538 ntTSL 422.45■■□□□ 1.187e-8■■□□□ 11.9
RPS3P23396 ACAA1-217ENST00000484284 580 ntTSL 217.34■□□□□ 0.377e-8■■□□□ 11.9
RPS3P23396 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.88■□□□□ 0.772e-6■■□□□ 11.9
RPS3P23396 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.35■□□□□ 0.052e-6■■□□□ 11.9
RPS3P23396 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC11.79□□□□□ -0.522e-6■■□□□ 11.9
RPS3P23396 RRBP1-205ENST00000398782 1191 ntAPPRIS ALT2 TSL 223.57■■□□□ 1.367e-26■■□□□ 11.9
RPS3P23396 SLC38A5-205ENST00000441948 871 ntTSL 514.04□□□□□ -0.166e-7■■□□□ 11.9
RPS3P23396 SLC38A5-204ENST00000440085 910 ntTSL 313.18□□□□□ -0.36e-7■■□□□ 11.9
RPS3P23396 SLC38A5-208ENST00000494034 525 ntTSL 510.15□□□□□ -0.786e-7■■□□□ 11.9
RPS3P23396 PLIN2-207ENST00000475923 1000 ntTSL 36.52□□□□□ -1.378e-12■■□□□ 11.9
RPS3P23396 PLIN2-206ENST00000472715 801 ntTSL 24.51□□□□□ -1.698e-12■■□□□ 11.9
RPS3P23396 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.172e-7■■□□□ 11.9
RPS3P23396 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.132e-7■■□□□ 11.9
RPS3P23396 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.122e-7■■□□□ 11.9
RPS3P23396 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.132e-7■■□□□ 11.9
RPS3P23396 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC11.99□□□□□ -0.492e-7■■□□□ 11.9
RPS3P23396 TFRC-214ENST00000483983 757 ntTSL 24.41□□□□□ -1.73e-7■■□□□ 11.9
RPS3P23396 LAMB2-206ENST00000469665 1092 ntTSL 216.28■□□□□ 0.21e-13■■□□□ 11.9
RPS3P23396 RPL23-209ENST00000584056 549 ntTSL 210.66□□□□□ -0.79e-21■■□□□ 11.9
RPS3P23396 RPL23-208ENST00000577760 3081 nt10.43□□□□□ -0.749e-21■■□□□ 11.9
RPS3P23396 LIME1-210ENST00000621325 2410 ntTSL 221.01■□□□□ 0.952e-11■■□□□ 11.8
RPS3P23396 LIME1-204ENST00000476183 809 ntAPPRIS ALT2 TSL 520.53■□□□□ 0.882e-11■■□□□ 11.8
RPS3P23396 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.72e-11■■□□□ 11.8
RPS3P23396 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.62e-11■■□□□ 11.8
RPS3P23396 AL121845.2-202ENST00000476221 446 ntTSL 517.27■□□□□ 0.362e-11■■□□□ 11.8
RPS3P23396 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.64■□□□□ 0.092e-11■■□□□ 11.8
RPS3P23396 LIME1-209ENST00000494776 391 ntTSL 515.53■□□□□ 0.082e-11■■□□□ 11.8
RPS3P23396 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.062e-11■■□□□ 11.8
RPS3P23396 CNP-211ENST00000592446 587 ntTSL 422.75■■□□□ 1.233e-9■■□□□ 11.8
RPS3P23396 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.058e-14■■□□□ 11.8
RPS3P23396 CSDE1-217ENST00000534699 2667 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.792e-6■■□□□ 11.8
RPS3P23396 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.94□□□□□ -1.142e-6■■□□□ 11.8
RPS3P23396 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.02□□□□□ -1.292e-6■■□□□ 11.8
RPS3P23396 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.02□□□□□ -1.292e-6■■□□□ 11.8
RPS3P23396 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.49□□□□□ -1.372e-6■■□□□ 11.8
RPS3P23396 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.47□□□□□ -1.372e-6■■□□□ 11.8
RPS3P23396 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.42e-6■■□□□ 11.8
RPS3P23396 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.38□□□□□ -1.552e-6■■□□□ 11.8
RPS3P23396 FLNA-212ENST00000466319 460 ntTSL 216.23■□□□□ 0.194e-9■■□□□ 11.8
RPS3P23396 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.842e-7■■□□□ 11.8
RPS3P23396 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.692e-7■■□□□ 11.8
RPS3P23396 RBM14-209ENST00000512283 567 ntTSL 417.8■□□□□ 0.442e-7■■□□□ 11.8
RPS3P23396 GORASP2-202ENST00000442798 1976 ntTSL 214.47□□□□□ -0.092e-7■■□□□ 11.8
RPS3P23396 HSPG2-214ENST00000635682 921 ntTSL 514.42□□□□□ -0.12e-7■■□□□ 11.8
RPS3P23396 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.162e-7■■□□□ 11.8
RPS3P23396 GORASP2-207ENST00000486498 2096 ntTSL 213.04□□□□□ -0.322e-7■■□□□ 11.8
RPS3P23396 RBM14-205ENST00000443702 732 ntTSL 3 BASIC12.73□□□□□ -0.372e-7■■□□□ 11.8
RPS3P23396 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC12.7□□□□□ -0.382e-7■■□□□ 11.8
RPS3P23396 HSPG2-212ENST00000493940 584 ntTSL 512.16□□□□□ -0.462e-7■■□□□ 11.8
RPS3P23396 RBM14-203ENST00000409372 876 ntTSL 2 BASIC11.86□□□□□ -0.512e-7■■□□□ 11.8
RPS3P23396 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.07□□□□□ -2.082e-7■■□□□ 11.8
RPS3P23396 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.271e-12■■□□□ 11.8
RPS3P23396 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.04■□□□□ 0.161e-12■■□□□ 11.8
RPS3P23396 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.53■□□□□ 0.081e-12■■□□□ 11.8
Retrieved 100 of 24,271 protein–RNA pairs in 254.9 ms