RNA–Protein interactions for RNA: ENST00000595072.1

CALM3-207, Transcript of calmodulin 3, humanhuman

TSL 2

Gene CALM3, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-207ENST00000595072 NISCHQ9Y2I1 1504 aa28.72■■■□□ 2.19
CALM3-207ENST00000595072 ABCC9O60706 1549 aa25.86■■□□□ 1.73
CALM3-207ENST00000595072 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
CALM3-207ENST00000595072 RB1CC1Q8TDY2 1594 aa24.56■■□□□ 1.52
CALM3-207ENST00000595072 NACADO15069 1562 aa24.37■■□□□ 1.49
CALM3-207ENST00000595072 DCAF8L2P0C7V8 631 aa24.36■■□□□ 1.49
CALM3-207ENST00000595072 DNAJC5BQ9UF47 199 aa24.27■■□□□ 1.48
CALM3-207ENST00000595072 PABPN1Q86U42 306 aaKnown RBP eCLIP24.09■■□□□ 1.45
CALM3-207ENST00000595072 UNC13AQ9UPW8 1703 aa24.07■■□□□ 1.44
CALM3-207ENST00000595072 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
CALM3-207ENST00000595072 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
CALM3-207ENST00000595072 ZCCHC6Q5VYS8 1495 aaKnown RBP23.79■■□□□ 1.4
CALM3-207ENST00000595072 DCAF1Q9Y4B6 1507 aa23.67■■□□□ 1.38
CALM3-207ENST00000595072 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
CALM3-207ENST00000595072 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
CALM3-207ENST00000595072 CC2D2AQ9P2K1 1620 aa23.34■■□□□ 1.33
CALM3-207ENST00000595072 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
CALM3-207ENST00000595072 CECR2Q9BXF3 1484 aa23.26■■□□□ 1.31
CALM3-207ENST00000595072 NCAPD3P42695 1498 aa22.48■■□□□ 1.19
CALM3-207ENST00000595072 ATAD2BQ9ULI0 1458 aa22.44■■□□□ 1.18
CALM3-207ENST00000595072 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
CALM3-207ENST00000595072 SMARCA2P51531 1590 aa22.37■■□□□ 1.17
CALM3-207ENST00000595072 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
CALM3-207ENST00000595072 ERCC6Q03468 1493 aa22.31■■□□□ 1.16
CALM3-207ENST00000595072 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
CALM3-207ENST00000595072 DNAJC5Q9H3Z4 198 aa22.27■■□□□ 1.16
CALM3-207ENST00000595072 CUX2O14529 1486 aa22.23■■□□□ 1.15
CALM3-207ENST00000595072 BAZ1BQ9UIG0 1483 aaKnown RBP22.23■■□□□ 1.15
CALM3-207ENST00000595072 NESP48681 1621 aa22.21■■□□□ 1.15
CALM3-207ENST00000595072 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
CALM3-207ENST00000595072 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
CALM3-207ENST00000595072 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
CALM3-207ENST00000595072 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.11
CALM3-207ENST00000595072 KIF21AQ7Z4S6 1674 aa21.93■■□□□ 1.1
CALM3-207ENST00000595072 WIZO95785 1651 aa21.92■■□□□ 1.1
CALM3-207ENST00000595072 PDS5BQ9NTI5 1447 aa21.87■■□□□ 1.09
CALM3-207ENST00000595072 CADPSQ9ULU8 1353 aa21.82■■□□□ 1.08
CALM3-207ENST00000595072 MRC2Q9UBG0 1479 aa21.7■■□□□ 1.06
CALM3-207ENST00000595072 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
CALM3-207ENST00000595072 WDR62O43379 1518 aa21.63■■□□□ 1.05
CALM3-207ENST00000595072 CEP164Q9UPV0 1460 aa21.61■■□□□ 1.05
CALM3-207ENST00000595072 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
CALM3-207ENST00000595072 FANCD2Q9BXW9 1451 aa21.59■■□□□ 1.05
CALM3-207ENST00000595072 CFTRP13569 1480 aa21.56■■□□□ 1.04
CALM3-207ENST00000595072 URB2Q14146 1524 aaKnown RBP21.42■■□□□ 1.02
CALM3-207ENST00000595072 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
CALM3-207ENST00000595072 CCDC88BA6NC98 1476 aa21.37■■□□□ 1.01
CALM3-207ENST00000595072 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
CALM3-207ENST00000595072 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
CALM3-207ENST00000595072 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
CALM3-207ENST00000595072 IFT140Q96RY7 1462 aa21.17■□□□□ 0.98
CALM3-207ENST00000595072 ZNF608Q9ULD9 1512 aaPredicted RBP21.17■□□□□ 0.98
CALM3-207ENST00000595072 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
CALM3-207ENST00000595072 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
CALM3-207ENST00000595072 EIF4G3O43432 1585 aaKnown RBP21.05■□□□□ 0.96
CALM3-207ENST00000595072 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
CALM3-207ENST00000595072 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
CALM3-207ENST00000595072 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
CALM3-207ENST00000595072 TARBP1Q13395 1621 aaKnown RBP20.99■□□□□ 0.95
CALM3-207ENST00000595072 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.951e-8■□□□□ 10
CALM3-207ENST00000595072 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
CALM3-207ENST00000595072 CHD1O14646 1710 aa20.93■□□□□ 0.94
CALM3-207ENST00000595072 RAD54L2Q9Y4B4 1467 aa20.92■□□□□ 0.94
CALM3-207ENST00000595072 ARHGEF11O15085 1522 aa20.9■□□□□ 0.94
CALM3-207ENST00000595072 FBLN2P98095 1184 aa20.89■□□□□ 0.93
CALM3-207ENST00000595072 SOGA1O94964 1423 aa20.87■□□□□ 0.93
CALM3-207ENST00000595072 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
CALM3-207ENST00000595072 FGD5Q6ZNL6 1462 aa20.84■□□□□ 0.93
CALM3-207ENST00000595072 CUX1P39880 1505 aa20.81■□□□□ 0.92
CALM3-207ENST00000595072 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
CALM3-207ENST00000595072 SUPT5HO00267 1087 aaKnown RBP20.78■□□□□ 0.92
CALM3-207ENST00000595072 SNAPC4Q5SXM2 1469 aa20.76■□□□□ 0.91
CALM3-207ENST00000595072 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
CALM3-207ENST00000595072 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
CALM3-207ENST00000595072 CHMP7Q8WUX9 453 aaPredicted RBP20.69■□□□□ 0.9
CALM3-207ENST00000595072 GRIN2BQ13224 1484 aa20.68■□□□□ 0.9
CALM3-207ENST00000595072 MAGI1Q96QZ7 1491 aaPredicted RBP20.67■□□□□ 0.9
CALM3-207ENST00000595072 PBRM1Q86U86 1689 aa20.64■□□□□ 0.9
CALM3-207ENST00000595072 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
CALM3-207ENST00000595072 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
CALM3-207ENST00000595072 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
CALM3-207ENST00000595072 SYNJ2O15056 1496 aa20.61■□□□□ 0.89
CALM3-207ENST00000595072 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
CALM3-207ENST00000595072 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
CALM3-207ENST00000595072 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
CALM3-207ENST00000595072 WRNQ14191 1432 aaPredicted RBP eCLIP20.49■□□□□ 0.87
CALM3-207ENST00000595072 BIVM-ERCC5R4GMW8 1640 aa20.48■□□□□ 0.87
CALM3-207ENST00000595072 TOP2BQ02880 1626 aa20.46■□□□□ 0.87
CALM3-207ENST00000595072 GRIN2AQ12879 1464 aa20.42■□□□□ 0.86
CALM3-207ENST00000595072 ADAMTS12P58397 1594 aa20.41■□□□□ 0.86
CALM3-207ENST00000595072 CEP170Q5SW79 1584 aa20.37■□□□□ 0.85
CALM3-207ENST00000595072 ERCC6L2Q5T890 1561 aa20.36■□□□□ 0.85
CALM3-207ENST00000595072 FHAD1B1AJZ9 1412 aa20.34■□□□□ 0.85
CALM3-207ENST00000595072 NUP160Q12769 1436 aa20.33■□□□□ 0.84
CALM3-207ENST00000595072 ERICH3Q5RHP9 1530 aa20.31■□□□□ 0.84
CALM3-207ENST00000595072 SHROOM2Q13796 1616 aa20.26■□□□□ 0.83
CALM3-207ENST00000595072 PRG4Q92954 1404 aaPredicted RBP20.17■□□□□ 0.82
CALM3-207ENST00000595072 JPH4Q96JJ6 628 aa20.16■□□□□ 0.82
CALM3-207ENST00000595072 RUSC2Q8N2Y8 1516 aa20.12■□□□□ 0.81
CALM3-207ENST00000595072 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms