RNA–Protein interactions for RNA: ENST00000509148.1

RACK1-221, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-221ENST00000509148 NISCHQ9Y2I1 1504 aa24.62■■□□□ 1.53
RACK1-221ENST00000509148 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
RACK1-221ENST00000509148 ABCC9O60706 1549 aa21.87■■□□□ 1.09
RACK1-221ENST00000509148 RB1CC1Q8TDY2 1594 aa20.91■□□□□ 0.94
RACK1-221ENST00000509148 NACADO15069 1562 aa20.81■□□□□ 0.92
RACK1-221ENST00000509148 DCAF8L2P0C7V8 631 aa20.79■□□□□ 0.92
RACK1-221ENST00000509148 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
RACK1-221ENST00000509148 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
RACK1-221ENST00000509148 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.86
RACK1-221ENST00000509148 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
RACK1-221ENST00000509148 DNAJC5BQ9UF47 199 aa20.37■□□□□ 0.85
RACK1-221ENST00000509148 UNC13AQ9UPW8 1703 aa20.29■□□□□ 0.84
RACK1-221ENST00000509148 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
RACK1-221ENST00000509148 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
RACK1-221ENST00000509148 SHROOM4Q9ULL8 1493 aa20.08■□□□□ 0.81
RACK1-221ENST00000509148 SCRIBQ14160 1630 aa20.04■□□□□ 0.8
RACK1-221ENST00000509148 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
RACK1-221ENST00000509148 CC2D2AQ9P2K1 1620 aa19.74■□□□□ 0.75
RACK1-221ENST00000509148 CECR2Q9BXF3 1484 aa19.72■□□□□ 0.75
RACK1-221ENST00000509148 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
RACK1-221ENST00000509148 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
RACK1-221ENST00000509148 SMARCA4P51532 1647 aa19.14■□□□□ 0.66
RACK1-221ENST00000509148 CHIC1Q5VXU3 224 aa19.14■□□□□ 0.65
RACK1-221ENST00000509148 SMARCA2P51531 1590 aa19.14■□□□□ 0.65
RACK1-221ENST00000509148 BAZ1AQ9NRL2 1556 aaPredicted RBP19.12■□□□□ 0.65
RACK1-221ENST00000509148 HMGXB3Q12766 1538 aa19.07■□□□□ 0.64
RACK1-221ENST00000509148 BAZ1BQ9UIG0 1483 aaKnown RBP19■□□□□ 0.63
RACK1-221ENST00000509148 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
RACK1-221ENST00000509148 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
RACK1-221ENST00000509148 ERCC6Q03468 1493 aa18.93■□□□□ 0.62
RACK1-221ENST00000509148 CUX2O14529 1486 aa18.84■□□□□ 0.61
RACK1-221ENST00000509148 NESP48681 1621 aa18.81■□□□□ 0.6
RACK1-221ENST00000509148 LAMC3Q9Y6N6 1575 aa18.75■□□□□ 0.59
RACK1-221ENST00000509148 WIZO95785 1651 aa18.69■□□□□ 0.58
RACK1-221ENST00000509148 PDS5BQ9NTI5 1447 aa18.69■□□□□ 0.58
RACK1-221ENST00000509148 DNAJC5Q9H3Z4 198 aa18.67■□□□□ 0.58
RACK1-221ENST00000509148 CADPSQ9ULU8 1353 aa18.67■□□□□ 0.58
RACK1-221ENST00000509148 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
RACK1-221ENST00000509148 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
RACK1-221ENST00000509148 KIF21AQ7Z4S6 1674 aa18.52■□□□□ 0.56
RACK1-221ENST00000509148 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.56
RACK1-221ENST00000509148 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
RACK1-221ENST00000509148 CFTRP13569 1480 aa18.46■□□□□ 0.54
RACK1-221ENST00000509148 CEP164Q9UPV0 1460 aa18.44■□□□□ 0.54
RACK1-221ENST00000509148 FANCD2Q9BXW9 1451 aa18.42■□□□□ 0.54
RACK1-221ENST00000509148 WDR62O43379 1518 aa18.39■□□□□ 0.54
RACK1-221ENST00000509148 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
RACK1-221ENST00000509148 URB2Q14146 1524 aaKnown RBP18.23■□□□□ 0.51
RACK1-221ENST00000509148 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
RACK1-221ENST00000509148 ABCC8Q09428 1581 aa18.12■□□□□ 0.49
RACK1-221ENST00000509148 TOPBP1Q92547 1522 aa18.08■□□□□ 0.48
RACK1-221ENST00000509148 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
RACK1-221ENST00000509148 OSCARQ8IYS5 282 aa18.05■□□□□ 0.48
RACK1-221ENST00000509148 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
RACK1-221ENST00000509148 ZNF608Q9ULD9 1512 aaPredicted RBP17.98■□□□□ 0.47
RACK1-221ENST00000509148 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
RACK1-221ENST00000509148 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
RACK1-221ENST00000509148 POLA1P09884 1462 aaPredicted RBP17.9■□□□□ 0.46
RACK1-221ENST00000509148 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
RACK1-221ENST00000509148 SOGA1O94964 1423 aa17.86■□□□□ 0.45
RACK1-221ENST00000509148 AQRO60306 1485 aaKnown RBP eCLIP17.86■□□□□ 0.452e-11■■■■■ 35.2
RACK1-221ENST00000509148 TARBP1Q13395 1621 aaKnown RBP17.86■□□□□ 0.45
RACK1-221ENST00000509148 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
RACK1-221ENST00000509148 FGD5Q6ZNL6 1462 aa17.81■□□□□ 0.44
RACK1-221ENST00000509148 CUX1P39880 1505 aa17.79■□□□□ 0.44
RACK1-221ENST00000509148 TDRD9Q8NDG6 1382 aaKnown RBP17.79■□□□□ 0.44
RACK1-221ENST00000509148 FBLN2P98095 1184 aa17.77■□□□□ 0.44
RACK1-221ENST00000509148 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
RACK1-221ENST00000509148 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
RACK1-221ENST00000509148 CHMP7Q8WUX9 453 aaPredicted RBP17.68■□□□□ 0.42
RACK1-221ENST00000509148 RIMBP3CA6NJZ7 1639 aa17.68■□□□□ 0.42
RACK1-221ENST00000509148 RIMBP3BA6NNM3 1639 aa17.68■□□□□ 0.42
RACK1-221ENST00000509148 RIMBP3Q9UFD9 1639 aa17.68■□□□□ 0.42
RACK1-221ENST00000509148 SNAPC4Q5SXM2 1469 aa17.68■□□□□ 0.42
RACK1-221ENST00000509148 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
RACK1-221ENST00000509148 MAGI1Q96QZ7 1491 aaPredicted RBP17.67■□□□□ 0.42
RACK1-221ENST00000509148 CHD1O14646 1710 aa17.67■□□□□ 0.42
RACK1-221ENST00000509148 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.41
RACK1-221ENST00000509148 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
RACK1-221ENST00000509148 ABCA10Q8WWZ4 1543 aa17.63■□□□□ 0.41
RACK1-221ENST00000509148 SYNJ2O15056 1496 aa17.6■□□□□ 0.41
RACK1-221ENST00000509148 CYB5RLQ6IPT4 315 aa17.59■□□□□ 0.41
RACK1-221ENST00000509148 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
RACK1-221ENST00000509148 TOP2BQ02880 1626 aa17.56■□□□□ 0.4
RACK1-221ENST00000509148 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
RACK1-221ENST00000509148 BIVM-ERCC5R4GMW8 1640 aa17.53■□□□□ 0.4
RACK1-221ENST00000509148 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
RACK1-221ENST00000509148 PBRM1Q86U86 1689 aa17.52■□□□□ 0.4
RACK1-221ENST00000509148 ARAP1Q96P48 1450 aa17.5■□□□□ 0.39
RACK1-221ENST00000509148 FHAD1B1AJZ9 1412 aa17.44■□□□□ 0.38
RACK1-221ENST00000509148 GRIN2AQ12879 1464 aa17.44■□□□□ 0.38
RACK1-221ENST00000509148 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
RACK1-221ENST00000509148 ADAMTS12P58397 1594 aa17.4■□□□□ 0.38
RACK1-221ENST00000509148 NUP160Q12769 1436 aa17.38■□□□□ 0.37
RACK1-221ENST00000509148 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
RACK1-221ENST00000509148 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
RACK1-221ENST00000509148 KIF27Q86VH2 1401 aa17.3■□□□□ 0.36
RACK1-221ENST00000509148 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
RACK1-221ENST00000509148 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
RACK1-221ENST00000509148 IGF1RP08069 1367 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms