RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 NISCHQ9Y2I1 1504 aa38.06■■■■□ 3.68
ERBB2-212ENST00000582788 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
ERBB2-212ENST00000582788 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
ERBB2-212ENST00000582788 ABCC9O60706 1549 aa31.56■■■□□ 2.64
ERBB2-212ENST00000582788 DCAF8L2P0C7V8 631 aa31.44■■■□□ 2.62
ERBB2-212ENST00000582788 DCAF1Q9Y4B6 1507 aa31.41■■■□□ 2.62
ERBB2-212ENST00000582788 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
ERBB2-212ENST00000582788 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
ERBB2-212ENST00000582788 NACADO15069 1562 aa30.7■■■□□ 2.51
ERBB2-212ENST00000582788 SCRIBQ14160 1630 aa30.5■■■□□ 2.47
ERBB2-212ENST00000582788 RB1CC1Q8TDY2 1594 aa30.43■■■□□ 2.46
ERBB2-212ENST00000582788 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
ERBB2-212ENST00000582788 UNC13AQ9UPW8 1703 aa29.87■■■□□ 2.37
ERBB2-212ENST00000582788 RSF1Q96T23 1441 aaPredicted RBP29.64■■■□□ 2.34
ERBB2-212ENST00000582788 CECR2Q9BXF3 1484 aa29.63■■■□□ 2.33
ERBB2-212ENST00000582788 BICRAQ9NZM4 1560 aa29.55■■■□□ 2.32
ERBB2-212ENST00000582788 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.31
ERBB2-212ENST00000582788 MROH2BQ7Z745 1585 aa29.46■■■□□ 2.31
ERBB2-212ENST00000582788 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
ERBB2-212ENST00000582788 WIZO95785 1651 aa29.24■■■□□ 2.27
ERBB2-212ENST00000582788 SMARCA4P51532 1647 aa29.22■■■□□ 2.27
ERBB2-212ENST00000582788 CHIC1Q5VXU3 224 aa29.04■■■□□ 2.24
ERBB2-212ENST00000582788 TOP2AP11388 1531 aaKnown RBP28.88■■■□□ 2.21
ERBB2-212ENST00000582788 DNAJC5BQ9UF47 199 aa28.85■■■□□ 2.21
ERBB2-212ENST00000582788 PEG3Q9GZU2 1588 aa28.82■■■□□ 2.2
ERBB2-212ENST00000582788 EIF4G1Q04637 1599 aaKnown RBP28.72■■■□□ 2.19
ERBB2-212ENST00000582788 ATAD2BQ9ULI0 1458 aa28.68■■■□□ 2.18
ERBB2-212ENST00000582788 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
ERBB2-212ENST00000582788 CCDC88BA6NC98 1476 aa28.63■■■□□ 2.17
ERBB2-212ENST00000582788 CC2D2AQ9P2K1 1620 aa28.59■■■□□ 2.17
ERBB2-212ENST00000582788 BAZ1BQ9UIG0 1483 aaKnown RBP28.52■■■□□ 2.16
ERBB2-212ENST00000582788 NCAPD3P42695 1498 aa28.37■■■□□ 2.13
ERBB2-212ENST00000582788 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
ERBB2-212ENST00000582788 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
ERBB2-212ENST00000582788 HRCP23327 699 aa28.22■■■□□ 2.11
ERBB2-212ENST00000582788 ABCC8Q09428 1581 aa28.15■■■□□ 2.1
ERBB2-212ENST00000582788 LOC105371045A0A1W2PR82 267 aa28■■■□□ 2.07
ERBB2-212ENST00000582788 PCGF6Q9BYE7 350 aa27.97■■■□□ 2.07
ERBB2-212ENST00000582788 FAM9AQ8IZU1 332 aaPredicted RBP27.92■■■□□ 2.06
ERBB2-212ENST00000582788 WRNQ14191 1432 aaPredicted RBP eCLIP27.88■■■□□ 2.05
ERBB2-212ENST00000582788 CFTRP13569 1480 aa27.82■■■□□ 2.04
ERBB2-212ENST00000582788 SYNJ1O43426 1573 aa27.79■■■□□ 2.04
ERBB2-212ENST00000582788 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
ERBB2-212ENST00000582788 SOGA1O94964 1423 aa27.67■■■□□ 2.02
ERBB2-212ENST00000582788 PRDM2Q13029 1718 aa27.65■■■□□ 2.02
ERBB2-212ENST00000582788 TOP2BQ02880 1626 aa27.62■■■□□ 2.01
ERBB2-212ENST00000582788 BIVM-ERCC5R4GMW8 1640 aa27.58■■■□□ 2.01
ERBB2-212ENST00000582788 RUSC2Q8N2Y8 1516 aa27.57■■■□□ 2
ERBB2-212ENST00000582788 EHMT2Q96KQ7 1210 aa27.57■■■□□ 2
ERBB2-212ENST00000582788 EEA1Q15075 1411 aa27.54■■■□□ 2
ERBB2-212ENST00000582788 CUX1P39880 1505 aa27.52■■■□□ 2
ERBB2-212ENST00000582788 TRIM26Q12899 539 aaPredicted RBP27.5■■□□□ 1.99
ERBB2-212ENST00000582788 PPARGC1BQ86YN6 1023 aaKnown RBP27.5■■□□□ 1.99
ERBB2-212ENST00000582788 CSRNP3Q8WYN3 585 aa27.44■■□□□ 1.98
ERBB2-212ENST00000582788 NESP48681 1621 aa27.43■■□□□ 1.98
ERBB2-212ENST00000582788 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
ERBB2-212ENST00000582788 LAMC3Q9Y6N6 1575 aa27.35■■□□□ 1.97
ERBB2-212ENST00000582788 GOLGA3Q08378 1498 aa27.21■■□□□ 1.95
ERBB2-212ENST00000582788 KIF21BO75037 1637 aa27.21■■□□□ 1.95
ERBB2-212ENST00000582788 ERCC6Q03468 1493 aa27.2■■□□□ 1.94
ERBB2-212ENST00000582788 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
ERBB2-212ENST00000582788 TNIKQ9UKE5 1360 aa27.18■■□□□ 1.94
ERBB2-212ENST00000582788 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
ERBB2-212ENST00000582788 DNMBPQ6XZF7 1577 aa27.15■■□□□ 1.94
ERBB2-212ENST00000582788 PDS5BQ9NTI5 1447 aa27.13■■□□□ 1.93
ERBB2-212ENST00000582788 KIF27Q86VH2 1401 aa27.13■■□□□ 1.93
ERBB2-212ENST00000582788 UBTFP17480 764 aaKnown RBP27.12■■□□□ 1.93
ERBB2-212ENST00000582788 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
ERBB2-212ENST00000582788 KIF21AQ7Z4S6 1674 aa27.09■■□□□ 1.93
ERBB2-212ENST00000582788 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
ERBB2-212ENST00000582788 RAPGEF2Q9Y4G8 1499 aa27.08■■□□□ 1.93
ERBB2-212ENST00000582788 URB2Q14146 1524 aaKnown RBP27.05■■□□□ 1.92
ERBB2-212ENST00000582788 CUX2O14529 1486 aa27.04■■□□□ 1.92
ERBB2-212ENST00000582788 PRXQ9BXM0 1461 aa27.03■■□□□ 1.92
ERBB2-212ENST00000582788 POLA1P09884 1462 aaPredicted RBP27.01■■□□□ 1.91
ERBB2-212ENST00000582788 ZEB1P37275 1124 aaPredicted RBP27■■□□□ 1.91
ERBB2-212ENST00000582788 ERICH3Q5RHP9 1530 aa26.97■■□□□ 1.91
ERBB2-212ENST00000582788 RAD54L2Q9Y4B4 1467 aa26.96■■□□□ 1.91
ERBB2-212ENST00000582788 THOC2Q8NI27 1593 aaKnown RBP26.95■■□□□ 1.91
ERBB2-212ENST00000582788 ABCA10Q8WWZ4 1543 aa26.91■■□□□ 1.9
ERBB2-212ENST00000582788 IGF1RP08069 1367 aa26.9■■□□□ 1.9
ERBB2-212ENST00000582788 MRC2Q9UBG0 1479 aa26.83■■□□□ 1.89
ERBB2-212ENST00000582788 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
ERBB2-212ENST00000582788 CLIP1P30622 1438 aa26.81■■□□□ 1.88
ERBB2-212ENST00000582788 CARMIL1Q5VZK9 1371 aa26.76■■□□□ 1.87
ERBB2-212ENST00000582788 WDR62O43379 1518 aa26.75■■□□□ 1.87
ERBB2-212ENST00000582788 TARBP1Q13395 1621 aaKnown RBP26.69■■□□□ 1.86
ERBB2-212ENST00000582788 RANGAP1P46060 587 aaPredicted RBP26.69■■□□□ 1.86
ERBB2-212ENST00000582788 ABCA5Q8WWZ7 1642 aa26.68■■□□□ 1.86
ERBB2-212ENST00000582788 TDRD9Q8NDG6 1382 aaKnown RBP26.67■■□□□ 1.86
ERBB2-212ENST00000582788 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
ERBB2-212ENST00000582788 CUL7Q14999 1698 aa26.62■■□□□ 1.85
ERBB2-212ENST00000582788 VPS8Q8N3P4 1428 aa26.6■■□□□ 1.85
ERBB2-212ENST00000582788 ARAP1Q96P48 1450 aa26.54■■□□□ 1.84
ERBB2-212ENST00000582788 ARHGAP35Q9NRY4 1499 aa26.49■■□□□ 1.83
ERBB2-212ENST00000582788 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
ERBB2-212ENST00000582788 AQRO60306 1485 aaKnown RBP eCLIP26.46■■□□□ 1.838e-7■■■■□ 19.9
ERBB2-212ENST00000582788 PBRM1Q86U86 1689 aa26.45■■□□□ 1.82
ERBB2-212ENST00000582788 TTBK1Q5TCY1 1321 aaPredicted RBP26.43■■□□□ 1.82
ERBB2-212ENST00000582788 ZNF608Q9ULD9 1512 aaPredicted RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms