Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KCNE3Q9Y6H6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.83■■□□□ 1.09
KCNE3Q9Y6H6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KCNE3Q9Y6H6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
KCNE3Q9Y6H6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.83■■□□□ 1.08
KCNE3Q9Y6H6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
KCNE3Q9Y6H6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KCNE3Q9Y6H6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
KCNE3Q9Y6H6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KCNE3Q9Y6H6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KCNE3Q9Y6H6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.82■■□□□ 1.08
KCNE3Q9Y6H6 AC087393.1-201ENST00000582896 145 ntBASIC21.82■■□□□ 1.08
KCNE3Q9Y6H6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KCNE3Q9Y6H6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
KCNE3Q9Y6H6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KCNE3Q9Y6H6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KCNE3Q9Y6H6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.81■■□□□ 1.08
KCNE3Q9Y6H6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.81■■□□□ 1.08
KCNE3Q9Y6H6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.81■■□□□ 1.08
KCNE3Q9Y6H6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KCNE3Q9Y6H6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
KCNE3Q9Y6H6 NTF6A-201ENST00000591175 560 ntBASIC21.81■■□□□ 1.08
KCNE3Q9Y6H6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
KCNE3Q9Y6H6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.8■■□□□ 1.08
KCNE3Q9Y6H6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KCNE3Q9Y6H6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KCNE3Q9Y6H6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KCNE3Q9Y6H6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.8■■□□□ 1.08
KCNE3Q9Y6H6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KCNE3Q9Y6H6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
KCNE3Q9Y6H6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KCNE3Q9Y6H6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.8■■□□□ 1.08
KCNE3Q9Y6H6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KCNE3Q9Y6H6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNE3Q9Y6H6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNE3Q9Y6H6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNE3Q9Y6H6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.79■■□□□ 1.08
KCNE3Q9Y6H6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNE3Q9Y6H6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KCNE3Q9Y6H6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNE3Q9Y6H6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNE3Q9Y6H6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNE3Q9Y6H6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.78■■□□□ 1.08
KCNE3Q9Y6H6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.78■■□□□ 1.08
KCNE3Q9Y6H6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNE3Q9Y6H6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNE3Q9Y6H6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.78■■□□□ 1.08
KCNE3Q9Y6H6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNE3Q9Y6H6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNE3Q9Y6H6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNE3Q9Y6H6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNE3Q9Y6H6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
KCNE3Q9Y6H6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNE3Q9Y6H6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
KCNE3Q9Y6H6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.77■■□□□ 1.08
KCNE3Q9Y6H6 DUX4L18-201ENST00000553347 1267 ntBASIC21.77■■□□□ 1.08
KCNE3Q9Y6H6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KCNE3Q9Y6H6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
KCNE3Q9Y6H6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNE3Q9Y6H6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
KCNE3Q9Y6H6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNE3Q9Y6H6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.76■■□□□ 1.07
KCNE3Q9Y6H6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNE3Q9Y6H6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNE3Q9Y6H6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNE3Q9Y6H6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNE3Q9Y6H6 HLA-L-211ENST00000482052 1765 ntBASIC21.76■■□□□ 1.07
KCNE3Q9Y6H6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNE3Q9Y6H6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNE3Q9Y6H6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNE3Q9Y6H6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
KCNE3Q9Y6H6 LINC00543-201ENST00000567234 1845 ntBASIC21.76■■□□□ 1.07
KCNE3Q9Y6H6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNE3Q9Y6H6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
KCNE3Q9Y6H6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.75■■□□□ 1.07
KCNE3Q9Y6H6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNE3Q9Y6H6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNE3Q9Y6H6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.75■■□□□ 1.07
KCNE3Q9Y6H6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
KCNE3Q9Y6H6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
KCNE3Q9Y6H6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNE3Q9Y6H6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNE3Q9Y6H6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNE3Q9Y6H6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.74■■□□□ 1.07
KCNE3Q9Y6H6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNE3Q9Y6H6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNE3Q9Y6H6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
KCNE3Q9Y6H6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNE3Q9Y6H6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNE3Q9Y6H6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNE3Q9Y6H6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KCNE3Q9Y6H6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNE3Q9Y6H6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNE3Q9Y6H6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.73■■□□□ 1.07
KCNE3Q9Y6H6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KCNE3Q9Y6H6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KCNE3Q9Y6H6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KCNE3Q9Y6H6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.73■■□□□ 1.07
KCNE3Q9Y6H6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNE3Q9Y6H6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms