Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
KCNE3Q9Y6H6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
KCNE3Q9Y6H6 AL356512.1-201ENST00000607453 1739 ntBASIC30.9■■■□□ 2.54
KCNE3Q9Y6H6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
KCNE3Q9Y6H6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.59■■■□□ 2.49
KCNE3Q9Y6H6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.54■■■□□ 2.48
KCNE3Q9Y6H6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
KCNE3Q9Y6H6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.39■■■□□ 2.45
KCNE3Q9Y6H6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
KCNE3Q9Y6H6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.05■■■□□ 2.4
KCNE3Q9Y6H6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30■■■□□ 2.39
KCNE3Q9Y6H6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
KCNE3Q9Y6H6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.8■■■□□ 2.36
KCNE3Q9Y6H6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
KCNE3Q9Y6H6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.44■■■□□ 2.3
KCNE3Q9Y6H6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.28■■■□□ 2.28
KCNE3Q9Y6H6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
KCNE3Q9Y6H6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
KCNE3Q9Y6H6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.21■■■□□ 2.27
KCNE3Q9Y6H6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.18■■■□□ 2.26
KCNE3Q9Y6H6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.04■■■□□ 2.24
KCNE3Q9Y6H6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
KCNE3Q9Y6H6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
KCNE3Q9Y6H6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
KCNE3Q9Y6H6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
KCNE3Q9Y6H6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.79■■■□□ 2.2
KCNE3Q9Y6H6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
KCNE3Q9Y6H6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
KCNE3Q9Y6H6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
KCNE3Q9Y6H6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
KCNE3Q9Y6H6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
KCNE3Q9Y6H6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
KCNE3Q9Y6H6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
KCNE3Q9Y6H6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.58■■■□□ 2.17
KCNE3Q9Y6H6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
KCNE3Q9Y6H6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
KCNE3Q9Y6H6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.44■■■□□ 2.14
KCNE3Q9Y6H6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.4■■■□□ 2.14
KCNE3Q9Y6H6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
KCNE3Q9Y6H6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
KCNE3Q9Y6H6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
KCNE3Q9Y6H6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.19■■■□□ 2.1
KCNE3Q9Y6H6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.07■■■□□ 2.08
KCNE3Q9Y6H6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.01■■■□□ 2.07
KCNE3Q9Y6H6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
KCNE3Q9Y6H6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
KCNE3Q9Y6H6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.05
KCNE3Q9Y6H6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
KCNE3Q9Y6H6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
KCNE3Q9Y6H6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
KCNE3Q9Y6H6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.85■■■□□ 2.05
KCNE3Q9Y6H6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
KCNE3Q9Y6H6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
KCNE3Q9Y6H6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
KCNE3Q9Y6H6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
KCNE3Q9Y6H6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
KCNE3Q9Y6H6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.74■■■□□ 2.03
KCNE3Q9Y6H6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
KCNE3Q9Y6H6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.7■■■□□ 2.02
KCNE3Q9Y6H6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
KCNE3Q9Y6H6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.66■■■□□ 2.02
KCNE3Q9Y6H6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
KCNE3Q9Y6H6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
KCNE3Q9Y6H6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.55■■■□□ 2
KCNE3Q9Y6H6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
KCNE3Q9Y6H6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.55■■■□□ 2
KCNE3Q9Y6H6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
KCNE3Q9Y6H6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
KCNE3Q9Y6H6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
KCNE3Q9Y6H6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
KCNE3Q9Y6H6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
KCNE3Q9Y6H6 AC015813.7-201ENST00000623294 581 ntBASIC27.4■■□□□ 1.98
KCNE3Q9Y6H6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
KCNE3Q9Y6H6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
KCNE3Q9Y6H6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
KCNE3Q9Y6H6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.26■■□□□ 1.95
KCNE3Q9Y6H6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
KCNE3Q9Y6H6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.24■■□□□ 1.95
KCNE3Q9Y6H6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
KCNE3Q9Y6H6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
KCNE3Q9Y6H6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
KCNE3Q9Y6H6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
KCNE3Q9Y6H6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
KCNE3Q9Y6H6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
KCNE3Q9Y6H6 AC145285.7-201ENST00000614819 1539 ntBASIC27.05■■□□□ 1.92
KCNE3Q9Y6H6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
KCNE3Q9Y6H6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
KCNE3Q9Y6H6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.99■■□□□ 1.91
KCNE3Q9Y6H6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
KCNE3Q9Y6H6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
KCNE3Q9Y6H6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
KCNE3Q9Y6H6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
KCNE3Q9Y6H6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KCNE3Q9Y6H6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.93■■□□□ 1.9
KCNE3Q9Y6H6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KCNE3Q9Y6H6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
KCNE3Q9Y6H6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.92■■□□□ 1.9
KCNE3Q9Y6H6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KCNE3Q9Y6H6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KCNE3Q9Y6H6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms