Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NEUROD4Q9HD90 LINC00543-201ENST00000567234 1845 ntBASIC22.09■■□□□ 1.13
NEUROD4Q9HD90 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NEUROD4Q9HD90 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.09■■□□□ 1.13
NEUROD4Q9HD90 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NEUROD4Q9HD90 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEUROD4Q9HD90 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEUROD4Q9HD90 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEUROD4Q9HD90 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEUROD4Q9HD90 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
NEUROD4Q9HD90 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NEUROD4Q9HD90 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.08■■□□□ 1.13
NEUROD4Q9HD90 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NEUROD4Q9HD90 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
NEUROD4Q9HD90 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.08■■□□□ 1.12
NEUROD4Q9HD90 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.08■■□□□ 1.12
NEUROD4Q9HD90 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NEUROD4Q9HD90 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.07■■□□□ 1.12
NEUROD4Q9HD90 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NEUROD4Q9HD90 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NEUROD4Q9HD90 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.07■■□□□ 1.12
NEUROD4Q9HD90 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NEUROD4Q9HD90 AC018755.3-202ENST00000596210 929 ntBASIC22.07■■□□□ 1.12
NEUROD4Q9HD90 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NEUROD4Q9HD90 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
NEUROD4Q9HD90 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NEUROD4Q9HD90 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NEUROD4Q9HD90 AL592293.1-201ENST00000502889 1188 ntBASIC22.06■■□□□ 1.12
NEUROD4Q9HD90 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NEUROD4Q9HD90 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEUROD4Q9HD90 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEUROD4Q9HD90 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEUROD4Q9HD90 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NEUROD4Q9HD90 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.06■■□□□ 1.12
NEUROD4Q9HD90 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NEUROD4Q9HD90 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NEUROD4Q9HD90 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.05■■□□□ 1.12
NEUROD4Q9HD90 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NEUROD4Q9HD90 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEUROD4Q9HD90 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEUROD4Q9HD90 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.04■■□□□ 1.12
NEUROD4Q9HD90 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NEUROD4Q9HD90 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NEUROD4Q9HD90 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.03■■□□□ 1.12
NEUROD4Q9HD90 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NEUROD4Q9HD90 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NEUROD4Q9HD90 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NEUROD4Q9HD90 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
NEUROD4Q9HD90 RPS2P7-201ENST00000447334 885 ntBASIC22.03■■□□□ 1.12
NEUROD4Q9HD90 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.03■■□□□ 1.12
NEUROD4Q9HD90 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.03■■□□□ 1.12
NEUROD4Q9HD90 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.03■■□□□ 1.12
NEUROD4Q9HD90 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NEUROD4Q9HD90 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.02■■□□□ 1.12
NEUROD4Q9HD90 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
NEUROD4Q9HD90 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.02■■□□□ 1.12
NEUROD4Q9HD90 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NEUROD4Q9HD90 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NEUROD4Q9HD90 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.02■■□□□ 1.11
NEUROD4Q9HD90 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
NEUROD4Q9HD90 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.11
NEUROD4Q9HD90 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.02■■□□□ 1.11
NEUROD4Q9HD90 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NEUROD4Q9HD90 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
NEUROD4Q9HD90 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NEUROD4Q9HD90 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
NEUROD4Q9HD90 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NEUROD4Q9HD90 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.01■■□□□ 1.11
NEUROD4Q9HD90 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.01■■□□□ 1.11
NEUROD4Q9HD90 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NEUROD4Q9HD90 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22■■□□□ 1.11
NEUROD4Q9HD90 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22■■□□□ 1.11
NEUROD4Q9HD90 SPCS2P3-201ENST00000500401 656 ntBASIC22■■□□□ 1.11
NEUROD4Q9HD90 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22■■□□□ 1.11
NEUROD4Q9HD90 MIR6765-201ENST00000614092 87 ntBASIC22■■□□□ 1.11
NEUROD4Q9HD90 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22■■□□□ 1.11
NEUROD4Q9HD90 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
NEUROD4Q9HD90 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NEUROD4Q9HD90 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NEUROD4Q9HD90 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
NEUROD4Q9HD90 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NEUROD4Q9HD90 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NEUROD4Q9HD90 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NEUROD4Q9HD90 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NEUROD4Q9HD90 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
NEUROD4Q9HD90 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
NEUROD4Q9HD90 AC087393.1-201ENST00000582896 145 ntBASIC21.98■■□□□ 1.11
NEUROD4Q9HD90 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.98■■□□□ 1.11
NEUROD4Q9HD90 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NEUROD4Q9HD90 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
NEUROD4Q9HD90 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.98■■□□□ 1.11
NEUROD4Q9HD90 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.98■■□□□ 1.11
NEUROD4Q9HD90 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEUROD4Q9HD90 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEUROD4Q9HD90 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.97■■□□□ 1.11
NEUROD4Q9HD90 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEUROD4Q9HD90 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEUROD4Q9HD90 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.97■■□□□ 1.11
NEUROD4Q9HD90 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEUROD4Q9HD90 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms