Protein–RNA interactions for Protein: Q9HD33

MRPL47, 39S ribosomal protein L47, mitochondrial, humanhuman

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47Q9HD33 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
MRPL47Q9HD33 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
MRPL47Q9HD33 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
MRPL47Q9HD33 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
MRPL47Q9HD33 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
MRPL47Q9HD33 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.72■■□□□ 1.55
MRPL47Q9HD33 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
MRPL47Q9HD33 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.72■■□□□ 1.55
MRPL47Q9HD33 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.72■■□□□ 1.55
MRPL47Q9HD33 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.72■■□□□ 1.55
MRPL47Q9HD33 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
MRPL47Q9HD33 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
MRPL47Q9HD33 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
MRPL47Q9HD33 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
MRPL47Q9HD33 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.71■■□□□ 1.55
MRPL47Q9HD33 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
MRPL47Q9HD33 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
MRPL47Q9HD33 U85056.1-201ENST00000616429 682 ntBASIC24.71■■□□□ 1.55
MRPL47Q9HD33 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
MRPL47Q9HD33 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
MRPL47Q9HD33 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
MRPL47Q9HD33 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.7■■□□□ 1.54
MRPL47Q9HD33 DUX4L9-201ENST00000449051 1259 ntBASIC24.7■■□□□ 1.54
MRPL47Q9HD33 AC087393.1-201ENST00000582896 145 ntBASIC24.7■■□□□ 1.54
MRPL47Q9HD33 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.7■■□□□ 1.54
MRPL47Q9HD33 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
MRPL47Q9HD33 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
MRPL47Q9HD33 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.69■■□□□ 1.54
MRPL47Q9HD33 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
MRPL47Q9HD33 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
MRPL47Q9HD33 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
MRPL47Q9HD33 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
MRPL47Q9HD33 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
MRPL47Q9HD33 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
MRPL47Q9HD33 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
MRPL47Q9HD33 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
MRPL47Q9HD33 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
MRPL47Q9HD33 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
MRPL47Q9HD33 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.67■■□□□ 1.54
MRPL47Q9HD33 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
MRPL47Q9HD33 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.67■■□□□ 1.54
MRPL47Q9HD33 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
MRPL47Q9HD33 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
MRPL47Q9HD33 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
MRPL47Q9HD33 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
MRPL47Q9HD33 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
MRPL47Q9HD33 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
MRPL47Q9HD33 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.66■■□□□ 1.54
MRPL47Q9HD33 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
MRPL47Q9HD33 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
MRPL47Q9HD33 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.66■■□□□ 1.54
MRPL47Q9HD33 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
MRPL47Q9HD33 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
MRPL47Q9HD33 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
MRPL47Q9HD33 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.65■■□□□ 1.54
MRPL47Q9HD33 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
MRPL47Q9HD33 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
MRPL47Q9HD33 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
MRPL47Q9HD33 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
MRPL47Q9HD33 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
MRPL47Q9HD33 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.64■■□□□ 1.54
MRPL47Q9HD33 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
MRPL47Q9HD33 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
MRPL47Q9HD33 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
MRPL47Q9HD33 AC129492.7-201ENST00000622992 756 ntBASIC24.64■■□□□ 1.54
MRPL47Q9HD33 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
MRPL47Q9HD33 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
MRPL47Q9HD33 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
MRPL47Q9HD33 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MRPL47Q9HD33 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.63■■□□□ 1.53
MRPL47Q9HD33 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
MRPL47Q9HD33 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.63■■□□□ 1.53
MRPL47Q9HD33 ABHD17AP5-201ENST00000580133 923 ntBASIC24.63■■□□□ 1.53
MRPL47Q9HD33 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MRPL47Q9HD33 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MRPL47Q9HD33 HLA-L-211ENST00000482052 1765 ntBASIC24.62■■□□□ 1.53
MRPL47Q9HD33 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.62■■□□□ 1.53
MRPL47Q9HD33 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MRPL47Q9HD33 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MRPL47Q9HD33 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MRPL47Q9HD33 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MRPL47Q9HD33 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MRPL47Q9HD33 KRT18P60-201ENST00000312876 1297 ntBASIC24.62■■□□□ 1.53
MRPL47Q9HD33 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.62■■□□□ 1.53
MRPL47Q9HD33 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
MRPL47Q9HD33 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
MRPL47Q9HD33 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
MRPL47Q9HD33 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
MRPL47Q9HD33 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
MRPL47Q9HD33 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.61■■□□□ 1.53
MRPL47Q9HD33 AL592295.1-201ENST00000400984 884 ntBASIC24.61■■□□□ 1.53
MRPL47Q9HD33 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
MRPL47Q9HD33 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.61■■□□□ 1.53
MRPL47Q9HD33 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
MRPL47Q9HD33 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
MRPL47Q9HD33 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
MRPL47Q9HD33 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
MRPL47Q9HD33 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.6■■□□□ 1.53
MRPL47Q9HD33 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
MRPL47Q9HD33 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms