Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SP110Q9HB58 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SP110Q9HB58 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
SP110Q9HB58 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.04■■□□□ 1.44
SP110Q9HB58 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SP110Q9HB58 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
SP110Q9HB58 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
SP110Q9HB58 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.03■■□□□ 1.44
SP110Q9HB58 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SP110Q9HB58 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SP110Q9HB58 AC022616.5-201ENST00000518796 181 ntBASIC24.03■■□□□ 1.44
SP110Q9HB58 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.03■■□□□ 1.44
SP110Q9HB58 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SP110Q9HB58 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SP110Q9HB58 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
SP110Q9HB58 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.02■■□□□ 1.44
SP110Q9HB58 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SP110Q9HB58 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.02■■□□□ 1.44
SP110Q9HB58 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SP110Q9HB58 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SP110Q9HB58 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SP110Q9HB58 AC142381.3-201ENST00000568208 1670 ntBASIC24.02■■□□□ 1.44
SP110Q9HB58 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SP110Q9HB58 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SP110Q9HB58 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SP110Q9HB58 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SP110Q9HB58 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
SP110Q9HB58 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
SP110Q9HB58 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.01■■□□□ 1.43
SP110Q9HB58 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SP110Q9HB58 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SP110Q9HB58 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SP110Q9HB58 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SP110Q9HB58 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SP110Q9HB58 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24■■□□□ 1.43
SP110Q9HB58 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SP110Q9HB58 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24■■□□□ 1.43
SP110Q9HB58 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
SP110Q9HB58 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SP110Q9HB58 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SP110Q9HB58 YBX1P4-201ENST00000392794 808 ntBASIC24■■□□□ 1.43
SP110Q9HB58 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
SP110Q9HB58 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
SP110Q9HB58 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SP110Q9HB58 MIR4508-201ENST00000584178 70 ntBASIC23.99■■□□□ 1.43
SP110Q9HB58 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SP110Q9HB58 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SP110Q9HB58 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SP110Q9HB58 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SP110Q9HB58 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SP110Q9HB58 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.98■■□□□ 1.43
SP110Q9HB58 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SP110Q9HB58 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SP110Q9HB58 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SP110Q9HB58 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.97■■□□□ 1.43
SP110Q9HB58 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.97■■□□□ 1.43
SP110Q9HB58 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SP110Q9HB58 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.97■■□□□ 1.43
SP110Q9HB58 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.97■■□□□ 1.43
SP110Q9HB58 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SP110Q9HB58 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.97■■□□□ 1.43
SP110Q9HB58 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SP110Q9HB58 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SP110Q9HB58 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.96■■□□□ 1.43
SP110Q9HB58 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
SP110Q9HB58 AC103834.1-201ENST00000520383 144 ntBASIC23.96■■□□□ 1.43
SP110Q9HB58 MIR6089-201ENST00000616698 64 ntBASIC23.96■■□□□ 1.43
SP110Q9HB58 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SP110Q9HB58 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.96■■□□□ 1.43
SP110Q9HB58 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SP110Q9HB58 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
SP110Q9HB58 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SP110Q9HB58 AC138932.3-201ENST00000567634 1902 ntBASIC23.95■■□□□ 1.42
SP110Q9HB58 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
SP110Q9HB58 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.95■■□□□ 1.42
SP110Q9HB58 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SP110Q9HB58 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SP110Q9HB58 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.94■■□□□ 1.42
SP110Q9HB58 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SP110Q9HB58 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.94■■□□□ 1.42
SP110Q9HB58 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SP110Q9HB58 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.94■■□□□ 1.42
SP110Q9HB58 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SP110Q9HB58 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SP110Q9HB58 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.93■■□□□ 1.42
SP110Q9HB58 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.93■■□□□ 1.42
SP110Q9HB58 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
SP110Q9HB58 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SP110Q9HB58 AC090877.2-201ENST00000558441 1738 ntBASIC23.93■■□□□ 1.42
SP110Q9HB58 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.92■■□□□ 1.42
SP110Q9HB58 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.92■■□□□ 1.42
SP110Q9HB58 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.92■■□□□ 1.42
SP110Q9HB58 AC011551.1-201ENST00000614101 683 ntBASIC23.92■■□□□ 1.42
SP110Q9HB58 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SP110Q9HB58 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.91■■□□□ 1.42
SP110Q9HB58 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SP110Q9HB58 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SP110Q9HB58 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.91■■□□□ 1.42
SP110Q9HB58 RARRES2P1-201ENST00000474487 481 ntBASIC23.91■■□□□ 1.42
SP110Q9HB58 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms