Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC129492.7-201ENST00000622992 756 ntBASIC23.81■■□□□ 1.4
LRRC40Q9H9A6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC40Q9H9A6 LINC01124-201ENST00000409786 2117 ntBASIC23.81■■□□□ 1.4
LRRC40Q9H9A6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC40Q9H9A6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC40Q9H9A6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
LRRC40Q9H9A6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC40Q9H9A6 KRT18P60-201ENST00000312876 1297 ntBASIC23.8■■□□□ 1.4
LRRC40Q9H9A6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC40Q9H9A6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC40Q9H9A6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC40Q9H9A6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.8■■□□□ 1.4
LRRC40Q9H9A6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
LRRC40Q9H9A6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC40Q9H9A6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LRRC40Q9H9A6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
LRRC40Q9H9A6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC40Q9H9A6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC40Q9H9A6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC40Q9H9A6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC40Q9H9A6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC40Q9H9A6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC40Q9H9A6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
LRRC40Q9H9A6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC40Q9H9A6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC40Q9H9A6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC40Q9H9A6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC40Q9H9A6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC40Q9H9A6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC40Q9H9A6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC40Q9H9A6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC40Q9H9A6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC40Q9H9A6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.76■■□□□ 1.39
LRRC40Q9H9A6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
LRRC40Q9H9A6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.76■■□□□ 1.39
LRRC40Q9H9A6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC40Q9H9A6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.76■■□□□ 1.39
LRRC40Q9H9A6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC40Q9H9A6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC40Q9H9A6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC40Q9H9A6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC40Q9H9A6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
LRRC40Q9H9A6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC40Q9H9A6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.75■■□□□ 1.39
LRRC40Q9H9A6 NTF6A-201ENST00000591175 560 ntBASIC23.75■■□□□ 1.39
LRRC40Q9H9A6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC40Q9H9A6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.75■■□□□ 1.39
LRRC40Q9H9A6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC40Q9H9A6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
LRRC40Q9H9A6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC40Q9H9A6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC40Q9H9A6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC40Q9H9A6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC40Q9H9A6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC40Q9H9A6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC40Q9H9A6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC40Q9H9A6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC40Q9H9A6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.74■■□□□ 1.39
LRRC40Q9H9A6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC40Q9H9A6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC40Q9H9A6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC40Q9H9A6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC40Q9H9A6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.73■■□□□ 1.39
LRRC40Q9H9A6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.73■■□□□ 1.39
LRRC40Q9H9A6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.73■■□□□ 1.39
LRRC40Q9H9A6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC40Q9H9A6 AC141586.4-201ENST00000624558 1573 ntBASIC23.73■■□□□ 1.39
LRRC40Q9H9A6 LINC00543-201ENST00000567234 1845 ntBASIC23.73■■□□□ 1.39
LRRC40Q9H9A6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC40Q9H9A6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
LRRC40Q9H9A6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC40Q9H9A6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC40Q9H9A6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC40Q9H9A6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.72■■□□□ 1.39
LRRC40Q9H9A6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC40Q9H9A6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
LRRC40Q9H9A6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC40Q9H9A6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC40Q9H9A6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC40Q9H9A6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC40Q9H9A6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
LRRC40Q9H9A6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC40Q9H9A6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.71■■□□□ 1.39
LRRC40Q9H9A6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC40Q9H9A6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC40Q9H9A6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
LRRC40Q9H9A6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
LRRC40Q9H9A6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC40Q9H9A6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.7■■□□□ 1.38
LRRC40Q9H9A6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
LRRC40Q9H9A6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.7■■□□□ 1.38
LRRC40Q9H9A6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.69■■□□□ 1.38
LRRC40Q9H9A6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRC40Q9H9A6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LRRC40Q9H9A6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRC40Q9H9A6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRC40Q9H9A6 AL592295.1-201ENST00000400984 884 ntBASIC23.69■■□□□ 1.38
LRRC40Q9H9A6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRC40Q9H9A6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRC40Q9H9A6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms