Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 AL157400.5-201ENST00000507624 621 ntBASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 SMPD5-203ENST00000639008 1464 ntBASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.58■□□□□ 0.88
COMMD4Q9H0A8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COMMD4Q9H0A8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD4Q9H0A8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.57■□□□□ 0.88
COMMD4Q9H0A8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.57■□□□□ 0.88
COMMD4Q9H0A8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
COMMD4Q9H0A8 AC012676.1-201ENST00000574705 1949 ntBASIC20.57■□□□□ 0.88
COMMD4Q9H0A8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 MIR7108-201ENST00000614319 87 ntBASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 AC060814.1-201ENST00000554326 538 ntBASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 AC004812.2-201ENST00000611079 2094 ntBASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms