Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEIL1Q96FI4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.71■□□□□ 0.75
NEIL1Q96FI4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
NEIL1Q96FI4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.7■□□□□ 0.74
NEIL1Q96FI4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEIL1Q96FI4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEIL1Q96FI4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.7■□□□□ 0.74
NEIL1Q96FI4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.7■□□□□ 0.74
NEIL1Q96FI4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEIL1Q96FI4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEIL1Q96FI4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEIL1Q96FI4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEIL1Q96FI4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEIL1Q96FI4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
NEIL1Q96FI4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
NEIL1Q96FI4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEIL1Q96FI4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NEIL1Q96FI4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEIL1Q96FI4 DUSP8P4-201ENST00000399538 1761 ntBASIC19.69■□□□□ 0.74
NEIL1Q96FI4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEIL1Q96FI4 AC093323.1-202ENST00000635031 2045 ntBASIC19.68■□□□□ 0.74
NEIL1Q96FI4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEIL1Q96FI4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEIL1Q96FI4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NEIL1Q96FI4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.68■□□□□ 0.74
NEIL1Q96FI4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NEIL1Q96FI4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEIL1Q96FI4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEIL1Q96FI4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEIL1Q96FI4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NEIL1Q96FI4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.67■□□□□ 0.74
NEIL1Q96FI4 KRT18P24-201ENST00000344739 1156 ntBASIC19.67■□□□□ 0.74
NEIL1Q96FI4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEIL1Q96FI4 THA1P-201ENST00000590384 1145 ntBASIC19.67■□□□□ 0.74
NEIL1Q96FI4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NEIL1Q96FI4 AL035685.1-201ENST00000636663 812 ntBASIC19.67■□□□□ 0.74
NEIL1Q96FI4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NEIL1Q96FI4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEIL1Q96FI4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NEIL1Q96FI4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.66■□□□□ 0.74
NEIL1Q96FI4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEIL1Q96FI4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEIL1Q96FI4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.66■□□□□ 0.74
NEIL1Q96FI4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEIL1Q96FI4 AC009299.2-201ENST00000482477 511 ntBASIC19.66■□□□□ 0.74
NEIL1Q96FI4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEIL1Q96FI4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NEIL1Q96FI4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEIL1Q96FI4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NEIL1Q96FI4 FOXO3B-201ENST00000395675 1928 ntBASIC19.66■□□□□ 0.74
NEIL1Q96FI4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.66■□□□□ 0.74
NEIL1Q96FI4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NEIL1Q96FI4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
NEIL1Q96FI4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEIL1Q96FI4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.65■□□□□ 0.74
NEIL1Q96FI4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NEIL1Q96FI4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NEIL1Q96FI4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NEIL1Q96FI4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
NEIL1Q96FI4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.74
NEIL1Q96FI4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.64■□□□□ 0.74
NEIL1Q96FI4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
NEIL1Q96FI4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.64■□□□□ 0.73
NEIL1Q96FI4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NEIL1Q96FI4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.64■□□□□ 0.73
NEIL1Q96FI4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEIL1Q96FI4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NEIL1Q96FI4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEIL1Q96FI4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEIL1Q96FI4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.63■□□□□ 0.73
NEIL1Q96FI4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.63■□□□□ 0.73
NEIL1Q96FI4 AC120024.1-201ENST00000562672 995 ntBASIC19.63■□□□□ 0.73
NEIL1Q96FI4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NEIL1Q96FI4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEIL1Q96FI4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEIL1Q96FI4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEIL1Q96FI4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NEIL1Q96FI4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NEIL1Q96FI4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.62■□□□□ 0.73
NEIL1Q96FI4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.62■□□□□ 0.73
NEIL1Q96FI4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.62■□□□□ 0.73
NEIL1Q96FI4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.62■□□□□ 0.73
NEIL1Q96FI4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.62■□□□□ 0.73
NEIL1Q96FI4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEIL1Q96FI4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEIL1Q96FI4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEIL1Q96FI4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEIL1Q96FI4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.61■□□□□ 0.73
NEIL1Q96FI4 AC011551.1-201ENST00000614101 683 ntBASIC19.61■□□□□ 0.73
NEIL1Q96FI4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.61■□□□□ 0.73
NEIL1Q96FI4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEIL1Q96FI4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEIL1Q96FI4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEIL1Q96FI4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEIL1Q96FI4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEIL1Q96FI4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEIL1Q96FI4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEIL1Q96FI4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NEIL1Q96FI4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEIL1Q96FI4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms