Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDH19Q8TAB3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH19Q8TAB3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH19Q8TAB3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH19Q8TAB3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.29■■□□□ 1.48
PCDH19Q8TAB3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH19Q8TAB3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH19Q8TAB3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
PCDH19Q8TAB3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PCDH19Q8TAB3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH19Q8TAB3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH19Q8TAB3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDH19Q8TAB3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.28■■□□□ 1.48
PCDH19Q8TAB3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDH19Q8TAB3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDH19Q8TAB3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDH19Q8TAB3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDH19Q8TAB3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDH19Q8TAB3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH19Q8TAB3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH19Q8TAB3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDH19Q8TAB3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDH19Q8TAB3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH19Q8TAB3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH19Q8TAB3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
PCDH19Q8TAB3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PCDH19Q8TAB3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH19Q8TAB3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH19Q8TAB3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH19Q8TAB3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH19Q8TAB3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH19Q8TAB3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.25■■□□□ 1.47
PCDH19Q8TAB3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDH19Q8TAB3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDH19Q8TAB3 LINC01124-201ENST00000409786 2117 ntBASIC24.25■■□□□ 1.47
PCDH19Q8TAB3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH19Q8TAB3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH19Q8TAB3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH19Q8TAB3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDH19Q8TAB3 DUX4L18-201ENST00000553347 1267 ntBASIC24.24■■□□□ 1.47
PCDH19Q8TAB3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH19Q8TAB3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH19Q8TAB3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH19Q8TAB3 LONRF2P2-201ENST00000439212 571 ntBASIC24.23■■□□□ 1.47
PCDH19Q8TAB3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDH19Q8TAB3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH19Q8TAB3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH19Q8TAB3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH19Q8TAB3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH19Q8TAB3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
PCDH19Q8TAB3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PCDH19Q8TAB3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH19Q8TAB3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH19Q8TAB3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH19Q8TAB3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH19Q8TAB3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDH19Q8TAB3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH19Q8TAB3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.21■■□□□ 1.47
PCDH19Q8TAB3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH19Q8TAB3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
PCDH19Q8TAB3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDH19Q8TAB3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDH19Q8TAB3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDH19Q8TAB3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
PCDH19Q8TAB3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH19Q8TAB3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDH19Q8TAB3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH19Q8TAB3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH19Q8TAB3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH19Q8TAB3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH19Q8TAB3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDH19Q8TAB3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDH19Q8TAB3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH19Q8TAB3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.19■■□□□ 1.46
PCDH19Q8TAB3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH19Q8TAB3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDH19Q8TAB3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH19Q8TAB3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH19Q8TAB3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH19Q8TAB3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDH19Q8TAB3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH19Q8TAB3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDH19Q8TAB3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDH19Q8TAB3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH19Q8TAB3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms