Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF440Q8IYI8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF440Q8IYI8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF440Q8IYI8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF440Q8IYI8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF440Q8IYI8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF440Q8IYI8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF440Q8IYI8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF440Q8IYI8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF440Q8IYI8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.43■■□□□ 1.02
ZNF440Q8IYI8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
ZNF440Q8IYI8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
ZNF440Q8IYI8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF440Q8IYI8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF440Q8IYI8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF440Q8IYI8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
ZNF440Q8IYI8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF440Q8IYI8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF440Q8IYI8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF440Q8IYI8 AC093323.1-202ENST00000635031 2045 ntBASIC21.42■■□□□ 1.02
ZNF440Q8IYI8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF440Q8IYI8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF440Q8IYI8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 LONRF2P2-201ENST00000439212 571 ntBASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 LINC01124-201ENST00000409786 2117 ntBASIC21.4■■□□□ 1.02
ZNF440Q8IYI8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ZNF440Q8IYI8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
ZNF440Q8IYI8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ZNF440Q8IYI8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF440Q8IYI8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF440Q8IYI8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF440Q8IYI8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF440Q8IYI8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.39■■□□□ 1.01
ZNF440Q8IYI8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF440Q8IYI8 LINC00543-201ENST00000567234 1845 ntBASIC21.39■■□□□ 1.01
ZNF440Q8IYI8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
ZNF440Q8IYI8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF440Q8IYI8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF440Q8IYI8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF440Q8IYI8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.38■■□□□ 1.01
ZNF440Q8IYI8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.38■■□□□ 1.01
ZNF440Q8IYI8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.38■■□□□ 1.01
ZNF440Q8IYI8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ZNF440Q8IYI8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF440Q8IYI8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF440Q8IYI8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.38■■□□□ 1.01
ZNF440Q8IYI8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF440Q8IYI8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
ZNF440Q8IYI8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
ZNF440Q8IYI8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF440Q8IYI8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF440Q8IYI8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.37■■□□□ 1.01
ZNF440Q8IYI8 AC139795.1-202ENST00000500444 432 ntBASIC21.37■■□□□ 1.01
ZNF440Q8IYI8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF440Q8IYI8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
ZNF440Q8IYI8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF440Q8IYI8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF440Q8IYI8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF440Q8IYI8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF440Q8IYI8 AC019171.1-201ENST00000601251 1056 ntBASIC21.36■■□□□ 1.01
ZNF440Q8IYI8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF440Q8IYI8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF440Q8IYI8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF440Q8IYI8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF440Q8IYI8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF440Q8IYI8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
ZNF440Q8IYI8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF440Q8IYI8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.35■■□□□ 1.01
ZNF440Q8IYI8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.35■■□□□ 1.01
ZNF440Q8IYI8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF440Q8IYI8 AC090877.2-201ENST00000558441 1738 ntBASIC21.35■■□□□ 1.01
ZNF440Q8IYI8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF440Q8IYI8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF440Q8IYI8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms