Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
ZNF440Q8IYI8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
ZNF440Q8IYI8 AL356512.1-201ENST00000607453 1739 ntBASIC30.36■■■□□ 2.45
ZNF440Q8IYI8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
ZNF440Q8IYI8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.18■■■□□ 2.42
ZNF440Q8IYI8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ZNF440Q8IYI8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.95■■■□□ 2.38
ZNF440Q8IYI8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ZNF440Q8IYI8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.82■■■□□ 2.36
ZNF440Q8IYI8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.58■■■□□ 2.33
ZNF440Q8IYI8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.51■■■□□ 2.32
ZNF440Q8IYI8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.44■■■□□ 2.3
ZNF440Q8IYI8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
ZNF440Q8IYI8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
ZNF440Q8IYI8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.04■■■□□ 2.24
ZNF440Q8IYI8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
ZNF440Q8IYI8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
ZNF440Q8IYI8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.76■■■□□ 2.19
ZNF440Q8IYI8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.68■■■□□ 2.18
ZNF440Q8IYI8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.64■■■□□ 2.18
ZNF440Q8IYI8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.55■■■□□ 2.16
ZNF440Q8IYI8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
ZNF440Q8IYI8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
ZNF440Q8IYI8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
ZNF440Q8IYI8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ZNF440Q8IYI8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
ZNF440Q8IYI8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
ZNF440Q8IYI8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.32■■■□□ 2.12
ZNF440Q8IYI8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ZNF440Q8IYI8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
ZNF440Q8IYI8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZNF440Q8IYI8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.09■■■□□ 2.09
ZNF440Q8IYI8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ZNF440Q8IYI8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ZNF440Q8IYI8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
ZNF440Q8IYI8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.95■■■□□ 2.07
ZNF440Q8IYI8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.93■■■□□ 2.06
ZNF440Q8IYI8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
ZNF440Q8IYI8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ZNF440Q8IYI8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ZNF440Q8IYI8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.67■■■□□ 2.02
ZNF440Q8IYI8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
ZNF440Q8IYI8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ZNF440Q8IYI8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
ZNF440Q8IYI8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.44■■□□□ 1.98
ZNF440Q8IYI8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ZNF440Q8IYI8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ZNF440Q8IYI8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ZNF440Q8IYI8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZNF440Q8IYI8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.38■■□□□ 1.97
ZNF440Q8IYI8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.38■■□□□ 1.97
ZNF440Q8IYI8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZNF440Q8IYI8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
ZNF440Q8IYI8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.96
ZNF440Q8IYI8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZNF440Q8IYI8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.28■■□□□ 1.96
ZNF440Q8IYI8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZNF440Q8IYI8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.25■■□□□ 1.95
ZNF440Q8IYI8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ZNF440Q8IYI8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ZNF440Q8IYI8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
ZNF440Q8IYI8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.13■■□□□ 1.93
ZNF440Q8IYI8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.13■■□□□ 1.93
ZNF440Q8IYI8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ZNF440Q8IYI8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ZNF440Q8IYI8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
ZNF440Q8IYI8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ZNF440Q8IYI8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZNF440Q8IYI8 AC015813.7-201ENST00000623294 581 ntBASIC26.95■■□□□ 1.9
ZNF440Q8IYI8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
ZNF440Q8IYI8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ZNF440Q8IYI8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ZNF440Q8IYI8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF440Q8IYI8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF440Q8IYI8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
ZNF440Q8IYI8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
ZNF440Q8IYI8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.79■■□□□ 1.88
ZNF440Q8IYI8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZNF440Q8IYI8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
ZNF440Q8IYI8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ZNF440Q8IYI8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ZNF440Q8IYI8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.68■■□□□ 1.86
ZNF440Q8IYI8 AC145285.7-201ENST00000614819 1539 ntBASIC26.66■■□□□ 1.86
ZNF440Q8IYI8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
ZNF440Q8IYI8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
ZNF440Q8IYI8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZNF440Q8IYI8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZNF440Q8IYI8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.54■■□□□ 1.84
ZNF440Q8IYI8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZNF440Q8IYI8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZNF440Q8IYI8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ZNF440Q8IYI8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.52■■□□□ 1.84
ZNF440Q8IYI8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.48■■□□□ 1.83
ZNF440Q8IYI8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
ZNF440Q8IYI8 AC006077.2-201ENST00000623591 457 ntBASIC26.36■■□□□ 1.81
ZNF440Q8IYI8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
ZNF440Q8IYI8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
ZNF440Q8IYI8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF440Q8IYI8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF440Q8IYI8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms