Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SMC5Q8IY18 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC29.22■■■□□ 2.27
SMC5Q8IY18 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
SMC5Q8IY18 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMC5Q8IY18 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMC5Q8IY18 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMC5Q8IY18 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
SMC5Q8IY18 HSD17B1P1-201ENST00000590052 955 ntBASIC29.21■■■□□ 2.27
SMC5Q8IY18 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
SMC5Q8IY18 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
SMC5Q8IY18 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.2■■■□□ 2.27
SMC5Q8IY18 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC29.19■■■□□ 2.26
SMC5Q8IY18 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
SMC5Q8IY18 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
SMC5Q8IY18 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
SMC5Q8IY18 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.19■■■□□ 2.26
SMC5Q8IY18 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
SMC5Q8IY18 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
SMC5Q8IY18 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.18■■■□□ 2.26
SMC5Q8IY18 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SMC5Q8IY18 RPS2P7-201ENST00000447334 885 ntBASIC29.18■■■□□ 2.26
SMC5Q8IY18 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.18■■■□□ 2.26
SMC5Q8IY18 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SMC5Q8IY18 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SMC5Q8IY18 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SMC5Q8IY18 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.17■■■□□ 2.26
SMC5Q8IY18 HLA-L-211ENST00000482052 1765 ntBASIC29.17■■■□□ 2.26
SMC5Q8IY18 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
SMC5Q8IY18 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.17■■■□□ 2.26
SMC5Q8IY18 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SMC5Q8IY18 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
SMC5Q8IY18 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SMC5Q8IY18 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
SMC5Q8IY18 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SMC5Q8IY18 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC29.16■■■□□ 2.26
SMC5Q8IY18 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SMC5Q8IY18 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
SMC5Q8IY18 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
SMC5Q8IY18 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SMC5Q8IY18 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.16■■■□□ 2.26
SMC5Q8IY18 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SMC5Q8IY18 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SMC5Q8IY18 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SMC5Q8IY18 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
SMC5Q8IY18 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SMC5Q8IY18 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SMC5Q8IY18 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
SMC5Q8IY18 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.14■■■□□ 2.26
SMC5Q8IY18 U85056.1-201ENST00000616429 682 ntBASIC29.14■■■□□ 2.26
SMC5Q8IY18 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.14■■■□□ 2.26
SMC5Q8IY18 AC004812.2-201ENST00000611079 2094 ntBASIC29.14■■■□□ 2.25
SMC5Q8IY18 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
SMC5Q8IY18 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SMC5Q8IY18 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SMC5Q8IY18 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC29.13■■■□□ 2.25
SMC5Q8IY18 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SMC5Q8IY18 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC29.13■■■□□ 2.25
SMC5Q8IY18 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SMC5Q8IY18 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SMC5Q8IY18 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SMC5Q8IY18 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SMC5Q8IY18 IDNK-203ENST00000405990 629 ntTSL 2 BASIC29.12■■■□□ 2.25
SMC5Q8IY18 DUX4L9-201ENST00000449051 1259 ntBASIC29.12■■■□□ 2.25
SMC5Q8IY18 AC087393.1-201ENST00000582896 145 ntBASIC29.12■■■□□ 2.25
SMC5Q8IY18 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
SMC5Q8IY18 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SMC5Q8IY18 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC29.11■■■□□ 2.25
SMC5Q8IY18 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC29.11■■■□□ 2.25
SMC5Q8IY18 AC018755.3-202ENST00000596210 929 ntBASIC29.11■■■□□ 2.25
SMC5Q8IY18 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SMC5Q8IY18 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SMC5Q8IY18 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SMC5Q8IY18 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SMC5Q8IY18 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC29.1■■■□□ 2.25
SMC5Q8IY18 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.1■■■□□ 2.25
SMC5Q8IY18 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
SMC5Q8IY18 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
SMC5Q8IY18 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
SMC5Q8IY18 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SMC5Q8IY18 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
SMC5Q8IY18 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
SMC5Q8IY18 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.09■■■□□ 2.25
SMC5Q8IY18 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.09■■■□□ 2.25
SMC5Q8IY18 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SMC5Q8IY18 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SMC5Q8IY18 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC29.08■■■□□ 2.25
SMC5Q8IY18 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
SMC5Q8IY18 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SMC5Q8IY18 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
SMC5Q8IY18 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.07■■■□□ 2.24
SMC5Q8IY18 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
SMC5Q8IY18 MIR6765-201ENST00000614092 87 ntBASIC29.07■■■□□ 2.24
SMC5Q8IY18 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SMC5Q8IY18 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SMC5Q8IY18 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.06■■■□□ 2.24
SMC5Q8IY18 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SMC5Q8IY18 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SMC5Q8IY18 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SMC5Q8IY18 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
SMC5Q8IY18 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms