Protein–RNA interactions for Protein: Q6P1M0

SLC27A4, Long-chain fatty acid transport protein 4, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A4Q6P1M0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
SLC27A4Q6P1M0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC27A4Q6P1M0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC27A4Q6P1M0 AC012676.1-201ENST00000574705 1949 ntBASIC21.29■■□□□ 1
SLC27A4Q6P1M0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.29■■□□□ 1
SLC27A4Q6P1M0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.29■■□□□ 1
SLC27A4Q6P1M0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.29■■□□□ 1
SLC27A4Q6P1M0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.29■■□□□ 1
SLC27A4Q6P1M0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC27A4Q6P1M0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.29■■□□□ 1
SLC27A4Q6P1M0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC27A4Q6P1M0 AC004812.2-201ENST00000611079 2094 ntBASIC21.28■■□□□ 1
SLC27A4Q6P1M0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.28■■□□□ 1
SLC27A4Q6P1M0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.28■■□□□ 1
SLC27A4Q6P1M0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.28■■□□□ 1
SLC27A4Q6P1M0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC27A4Q6P1M0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC27A4Q6P1M0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC27A4Q6P1M0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.28■■□□□ 1
SLC27A4Q6P1M0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC27A4Q6P1M0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.27■■□□□ 1
SLC27A4Q6P1M0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC27A4Q6P1M0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SLC27A4Q6P1M0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC27A4Q6P1M0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC27A4Q6P1M0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC27A4Q6P1M0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.27■■□□□ 1
SLC27A4Q6P1M0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC27A4Q6P1M0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.27■■□□□ 1
SLC27A4Q6P1M0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC27A4Q6P1M0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC27A4Q6P1M0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC27A4Q6P1M0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC27A4Q6P1M0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC27A4Q6P1M0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC27A4Q6P1M0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC27A4Q6P1M0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SLC27A4Q6P1M0 SMPD5-203ENST00000639008 1464 ntBASIC21.26■□□□□ 0.99
SLC27A4Q6P1M0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC27A4Q6P1M0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC27A4Q6P1M0 AC060814.1-201ENST00000554326 538 ntBASIC21.25■□□□□ 0.99
SLC27A4Q6P1M0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC27A4Q6P1M0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC27A4Q6P1M0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC27A4Q6P1M0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC27A4Q6P1M0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC27A4Q6P1M0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC27A4Q6P1M0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC27A4Q6P1M0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SLC27A4Q6P1M0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC27A4Q6P1M0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SLC27A4Q6P1M0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
SLC27A4Q6P1M0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SLC27A4Q6P1M0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC27A4Q6P1M0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 AC068473.5-201ENST00000616428 2072 ntBASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 DUSP8P5-201ENST00000422884 1815 ntBASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC27A4Q6P1M0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SLC27A4Q6P1M0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC27A4Q6P1M0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC27A4Q6P1M0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
SLC27A4Q6P1M0 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC27A4Q6P1M0 ABCB10P4-201ENST00000566803 2184 ntBASIC21.2■□□□□ 0.98
SLC27A4Q6P1M0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC27A4Q6P1M0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
SLC27A4Q6P1M0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC27A4Q6P1M0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.19■□□□□ 0.98
SLC27A4Q6P1M0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC27A4Q6P1M0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC27A4Q6P1M0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SLC27A4Q6P1M0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC27A4Q6P1M0 AC092296.2-201ENST00000589470 999 ntBASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms