Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 AF131216.4-201ENST00000638924 1588 ntBASIC30.41■■■□□ 2.46
EIF4A1P60842 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.4■■■□□ 2.46
EIF4A1P60842 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.4■■■□□ 2.46
EIF4A1P60842 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.4■■■□□ 2.46
EIF4A1P60842 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
EIF4A1P60842 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
EIF4A1P60842 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.39■■■□□ 2.46
EIF4A1P60842 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
EIF4A1P60842 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
EIF4A1P60842 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
EIF4A1P60842 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
EIF4A1P60842 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.39■■■□□ 2.46
EIF4A1P60842 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.39■■■□□ 2.46
EIF4A1P60842 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
EIF4A1P60842 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.38■■■□□ 2.45
EIF4A1P60842 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
EIF4A1P60842 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
EIF4A1P60842 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.38■■■□□ 2.45
EIF4A1P60842 DUSP8P4-201ENST00000399538 1761 ntBASIC30.38■■■□□ 2.45
EIF4A1P60842 AC091060.1-201ENST00000623524 1766 ntBASIC30.37■■■□□ 2.45
EIF4A1P60842 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.37■■■□□ 2.45
EIF4A1P60842 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.37■■■□□ 2.45
EIF4A1P60842 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.37■■■□□ 2.45
EIF4A1P60842 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.37■■■□□ 2.45
EIF4A1P60842 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
EIF4A1P60842 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
EIF4A1P60842 AC090877.2-201ENST00000558441 1738 ntBASIC30.36■■■□□ 2.45
EIF4A1P60842 TSPY9P-201ENST00000440215 945 ntBASIC30.36■■■□□ 2.45
EIF4A1P60842 TSPY11P-201ENST00000442607 1045 ntBASIC30.36■■■□□ 2.45
EIF4A1P60842 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
EIF4A1P60842 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.36■■■□□ 2.45
EIF4A1P60842 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
EIF4A1P60842 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
EIF4A1P60842 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.35■■■□□ 2.45
EIF4A1P60842 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.35■■■□□ 2.45
EIF4A1P60842 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
EIF4A1P60842 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.35■■■□□ 2.45
EIF4A1P60842 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.34■■■□□ 2.45
EIF4A1P60842 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.34■■■□□ 2.45
EIF4A1P60842 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
EIF4A1P60842 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.33■■■□□ 2.45
EIF4A1P60842 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.33■■■□□ 2.45
EIF4A1P60842 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
EIF4A1P60842 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.33■■■□□ 2.45
EIF4A1P60842 KRT16P3-201ENST00000439127 1283 ntBASIC30.33■■■□□ 2.45
EIF4A1P60842 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.33■■■□□ 2.45
EIF4A1P60842 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
EIF4A1P60842 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
EIF4A1P60842 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
EIF4A1P60842 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.32■■■□□ 2.44
EIF4A1P60842 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.31■■■□□ 2.44
EIF4A1P60842 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.31■■■□□ 2.44
EIF4A1P60842 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.31■■■□□ 2.44
EIF4A1P60842 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.31■■■□□ 2.44
EIF4A1P60842 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
EIF4A1P60842 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.29■■■□□ 2.44
EIF4A1P60842 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.29■■■□□ 2.44
EIF4A1P60842 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
EIF4A1P60842 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.28■■■□□ 2.44
EIF4A1P60842 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
EIF4A1P60842 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.28■■■□□ 2.44
EIF4A1P60842 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
EIF4A1P60842 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.28■■■□□ 2.44
EIF4A1P60842 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
EIF4A1P60842 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
EIF4A1P60842 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
EIF4A1P60842 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
EIF4A1P60842 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
EIF4A1P60842 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
EIF4A1P60842 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.44
EIF4A1P60842 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
EIF4A1P60842 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
EIF4A1P60842 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
EIF4A1P60842 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.26■■■□□ 2.43
EIF4A1P60842 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.26■■■□□ 2.43
EIF4A1P60842 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.26■■■□□ 2.43
EIF4A1P60842 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
EIF4A1P60842 AC145676.1-201ENST00000514988 2004 ntBASIC30.25■■■□□ 2.43
EIF4A1P60842 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
EIF4A1P60842 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.25■■■□□ 2.43
EIF4A1P60842 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.25■■■□□ 2.43
EIF4A1P60842 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
EIF4A1P60842 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.24■■■□□ 2.43
EIF4A1P60842 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
EIF4A1P60842 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
EIF4A1P60842 SLC6A10P-202ENST00000431994 2058 ntBASIC30.24■■■□□ 2.43
EIF4A1P60842 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
EIF4A1P60842 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
EIF4A1P60842 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
EIF4A1P60842 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
EIF4A1P60842 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.22■■■□□ 2.43
EIF4A1P60842 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.22■■■□□ 2.43
EIF4A1P60842 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.22■■■□□ 2.43
EIF4A1P60842 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
EIF4A1P60842 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
EIF4A1P60842 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
EIF4A1P60842 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30.22■■■□□ 2.43
EIF4A1P60842 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
EIF4A1P60842 AC010997.5-201ENST00000609182 354 ntBASIC30.21■■■□□ 2.43
EIF4A1P60842 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms