Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CSB-PGBD3P0DP91 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CSB-PGBD3P0DP91 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CSB-PGBD3P0DP91 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CSB-PGBD3P0DP91 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC31.48■■■□□ 2.63
CSB-PGBD3P0DP91 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC31.48■■■□□ 2.63
CSB-PGBD3P0DP91 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
CSB-PGBD3P0DP91 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CSB-PGBD3P0DP91 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC31.47■■■□□ 2.63
CSB-PGBD3P0DP91 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CSB-PGBD3P0DP91 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CSB-PGBD3P0DP91 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CSB-PGBD3P0DP91 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
CSB-PGBD3P0DP91 CLTA-206ENST00000466396 695 ntTSL 2 BASIC31.46■■■□□ 2.63
CSB-PGBD3P0DP91 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CSB-PGBD3P0DP91 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CSB-PGBD3P0DP91 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CSB-PGBD3P0DP91 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.45■■■□□ 2.63
CSB-PGBD3P0DP91 SNX5-217ENST00000606557 1087 ntBASIC31.45■■■□□ 2.63
CSB-PGBD3P0DP91 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
CSB-PGBD3P0DP91 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CSB-PGBD3P0DP91 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
CSB-PGBD3P0DP91 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.44■■■□□ 2.62
CSB-PGBD3P0DP91 UNC93B3-201ENST00000308076 687 ntBASIC31.43■■■□□ 2.62
CSB-PGBD3P0DP91 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.43■■■□□ 2.62
CSB-PGBD3P0DP91 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CSB-PGBD3P0DP91 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CSB-PGBD3P0DP91 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CSB-PGBD3P0DP91 RARRES2P6-201ENST00000567333 442 ntBASIC31.42■■■□□ 2.62
CSB-PGBD3P0DP91 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CSB-PGBD3P0DP91 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CSB-PGBD3P0DP91 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
CSB-PGBD3P0DP91 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
CSB-PGBD3P0DP91 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CSB-PGBD3P0DP91 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CSB-PGBD3P0DP91 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC31.41■■■□□ 2.62
CSB-PGBD3P0DP91 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC31.41■■■□□ 2.62
CSB-PGBD3P0DP91 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC31.41■■■□□ 2.62
CSB-PGBD3P0DP91 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.41■■■□□ 2.62
CSB-PGBD3P0DP91 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.4■■■□□ 2.62
CSB-PGBD3P0DP91 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC31.4■■■□□ 2.62
CSB-PGBD3P0DP91 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC31.4■■■□□ 2.62
CSB-PGBD3P0DP91 AL136162.1-201ENST00000607711 1078 ntBASIC31.4■■■□□ 2.62
CSB-PGBD3P0DP91 MIR6722-201ENST00000617286 78 ntBASIC31.4■■■□□ 2.62
CSB-PGBD3P0DP91 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CSB-PGBD3P0DP91 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CSB-PGBD3P0DP91 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CSB-PGBD3P0DP91 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CSB-PGBD3P0DP91 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CSB-PGBD3P0DP91 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CSB-PGBD3P0DP91 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CSB-PGBD3P0DP91 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CSB-PGBD3P0DP91 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CSB-PGBD3P0DP91 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
CSB-PGBD3P0DP91 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CSB-PGBD3P0DP91 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.38■■■□□ 2.61
CSB-PGBD3P0DP91 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CSB-PGBD3P0DP91 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
CSB-PGBD3P0DP91 AC092666.2-201ENST00000613287 246 ntBASIC31.38■■■□□ 2.61
CSB-PGBD3P0DP91 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.38■■■□□ 2.61
CSB-PGBD3P0DP91 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.37■■■□□ 2.61
CSB-PGBD3P0DP91 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC31.37■■■□□ 2.61
CSB-PGBD3P0DP91 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.37■■■□□ 2.61
CSB-PGBD3P0DP91 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CSB-PGBD3P0DP91 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CSB-PGBD3P0DP91 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
CSB-PGBD3P0DP91 AC090877.2-201ENST00000558441 1738 ntBASIC31.36■■■□□ 2.61
CSB-PGBD3P0DP91 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CSB-PGBD3P0DP91 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC31.36■■■□□ 2.61
CSB-PGBD3P0DP91 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
CSB-PGBD3P0DP91 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
CSB-PGBD3P0DP91 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
CSB-PGBD3P0DP91 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CSB-PGBD3P0DP91 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.35■■■□□ 2.61
CSB-PGBD3P0DP91 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CSB-PGBD3P0DP91 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CSB-PGBD3P0DP91 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.34■■■□□ 2.61
CSB-PGBD3P0DP91 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.34■■■□□ 2.61
CSB-PGBD3P0DP91 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.34■■■□□ 2.61
CSB-PGBD3P0DP91 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.34■■■□□ 2.61
CSB-PGBD3P0DP91 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
CSB-PGBD3P0DP91 AC135279.3-201ENST00000610945 1311 ntBASIC31.33■■■□□ 2.61
CSB-PGBD3P0DP91 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CSB-PGBD3P0DP91 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CSB-PGBD3P0DP91 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
CSB-PGBD3P0DP91 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CSB-PGBD3P0DP91 SRD5A1P1-201ENST00000442297 786 ntBASIC31.33■■■□□ 2.61
CSB-PGBD3P0DP91 AL031432.3-201ENST00000607698 485 ntBASIC31.33■■■□□ 2.61
CSB-PGBD3P0DP91 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
CSB-PGBD3P0DP91 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CSB-PGBD3P0DP91 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
CSB-PGBD3P0DP91 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CSB-PGBD3P0DP91 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CSB-PGBD3P0DP91 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
CSB-PGBD3P0DP91 LGR4-203ENST00000480977 492 ntTSL 2 BASIC31.31■■■□□ 2.6
CSB-PGBD3P0DP91 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.31■■■□□ 2.6
CSB-PGBD3P0DP91 SUDS3P1-201ENST00000505831 966 ntBASIC31.31■■■□□ 2.6
CSB-PGBD3P0DP91 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC31.31■■■□□ 2.6
CSB-PGBD3P0DP91 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CSB-PGBD3P0DP91 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms