Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
C4BPAP04003 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
C4BPAP04003 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
C4BPAP04003 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.38■■□□□ 1.65
C4BPAP04003 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
C4BPAP04003 MIR6089-201ENST00000616698 64 ntBASIC25.38■■□□□ 1.65
C4BPAP04003 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
C4BPAP04003 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
C4BPAP04003 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
C4BPAP04003 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.37■■□□□ 1.65
C4BPAP04003 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.37■■□□□ 1.65
C4BPAP04003 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.37■■□□□ 1.65
C4BPAP04003 AC022616.5-201ENST00000518796 181 ntBASIC25.37■■□□□ 1.65
C4BPAP04003 MIR4508-201ENST00000584178 70 ntBASIC25.37■■□□□ 1.65
C4BPAP04003 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.37■■□□□ 1.65
C4BPAP04003 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.36■■□□□ 1.65
C4BPAP04003 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
C4BPAP04003 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
C4BPAP04003 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.36■■□□□ 1.65
C4BPAP04003 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.36■■□□□ 1.65
C4BPAP04003 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.36■■□□□ 1.65
C4BPAP04003 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.36■■□□□ 1.65
C4BPAP04003 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.35■■□□□ 1.65
C4BPAP04003 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.35■■□□□ 1.65
C4BPAP04003 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.35■■□□□ 1.65
C4BPAP04003 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
C4BPAP04003 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.34■■□□□ 1.65
C4BPAP04003 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
C4BPAP04003 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.33■■□□□ 1.65
C4BPAP04003 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
C4BPAP04003 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
C4BPAP04003 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
C4BPAP04003 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.33■■□□□ 1.65
C4BPAP04003 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.33■■□□□ 1.65
C4BPAP04003 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.33■■□□□ 1.65
C4BPAP04003 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.64
C4BPAP04003 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.33■■□□□ 1.64
C4BPAP04003 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
C4BPAP04003 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.32■■□□□ 1.64
C4BPAP04003 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
C4BPAP04003 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
C4BPAP04003 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
C4BPAP04003 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
C4BPAP04003 KRT8P33-201ENST00000508125 1423 ntBASIC25.31■■□□□ 1.64
C4BPAP04003 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.31■■□□□ 1.64
C4BPAP04003 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
C4BPAP04003 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
C4BPAP04003 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
C4BPAP04003 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
C4BPAP04003 AP003733.4-201ENST00000623785 1697 ntBASIC25.3■■□□□ 1.64
C4BPAP04003 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.3■■□□□ 1.64
C4BPAP04003 AC090877.2-201ENST00000558441 1738 ntBASIC25.3■■□□□ 1.64
C4BPAP04003 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.3■■□□□ 1.64
C4BPAP04003 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.3■■□□□ 1.64
C4BPAP04003 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.3■■□□□ 1.64
C4BPAP04003 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.3■■□□□ 1.64
C4BPAP04003 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.3■■□□□ 1.64
C4BPAP04003 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
C4BPAP04003 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
C4BPAP04003 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.29■■□□□ 1.64
C4BPAP04003 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
C4BPAP04003 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.29■■□□□ 1.64
C4BPAP04003 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
C4BPAP04003 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.29■■□□□ 1.64
C4BPAP04003 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
C4BPAP04003 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
C4BPAP04003 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
C4BPAP04003 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
C4BPAP04003 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
C4BPAP04003 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.28■■□□□ 1.64
C4BPAP04003 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
C4BPAP04003 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
C4BPAP04003 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
C4BPAP04003 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
C4BPAP04003 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
C4BPAP04003 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
C4BPAP04003 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
C4BPAP04003 KRT18P24-201ENST00000344739 1156 ntBASIC25.26■■□□□ 1.63
C4BPAP04003 AC120024.1-201ENST00000562672 995 ntBASIC25.26■■□□□ 1.63
C4BPAP04003 AC103724.3-201ENST00000564481 992 ntBASIC25.26■■□□□ 1.63
C4BPAP04003 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
C4BPAP04003 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.26■■□□□ 1.63
C4BPAP04003 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
C4BPAP04003 YBX1P4-201ENST00000392794 808 ntBASIC25.25■■□□□ 1.63
C4BPAP04003 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
C4BPAP04003 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
C4BPAP04003 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
C4BPAP04003 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
C4BPAP04003 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
C4BPAP04003 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
C4BPAP04003 AC011551.1-201ENST00000614101 683 ntBASIC25.24■■□□□ 1.63
C4BPAP04003 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
C4BPAP04003 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.24■■□□□ 1.63
C4BPAP04003 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.23■■□□□ 1.63
C4BPAP04003 RARRES2P1-201ENST00000474487 481 ntBASIC25.23■■□□□ 1.63
C4BPAP04003 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
C4BPAP04003 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
C4BPAP04003 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
C4BPAP04003 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
C4BPAP04003 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms