Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL136116.3-201ENST00000402907 1138 ntBASIC25.87■■□□□ 1.73
CHRNA1P02708 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CHRNA1P02708 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.87■■□□□ 1.73
CHRNA1P02708 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHRNA1P02708 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.86■■□□□ 1.73
CHRNA1P02708 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CHRNA1P02708 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CHRNA1P02708 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.86■■□□□ 1.73
CHRNA1P02708 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CHRNA1P02708 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.86■■□□□ 1.73
CHRNA1P02708 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CHRNA1P02708 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHRNA1P02708 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
CHRNA1P02708 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.85■■□□□ 1.73
CHRNA1P02708 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.85■■□□□ 1.73
CHRNA1P02708 AL139246.5-201ENST00000606645 996 ntBASIC25.85■■□□□ 1.73
CHRNA1P02708 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CHRNA1P02708 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHRNA1P02708 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CHRNA1P02708 AL356740.2-201ENST00000601559 647 ntBASIC25.84■■□□□ 1.73
CHRNA1P02708 MIR4466-201ENST00000606121 54 ntBASIC25.84■■□□□ 1.73
CHRNA1P02708 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CHRNA1P02708 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHRNA1P02708 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.83■■□□□ 1.73
CHRNA1P02708 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHRNA1P02708 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHRNA1P02708 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CHRNA1P02708 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
CHRNA1P02708 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
CHRNA1P02708 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHRNA1P02708 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
CHRNA1P02708 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.82■■□□□ 1.72
CHRNA1P02708 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.82■■□□□ 1.72
CHRNA1P02708 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.82■■□□□ 1.72
CHRNA1P02708 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.82■■□□□ 1.72
CHRNA1P02708 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHRNA1P02708 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.82■■□□□ 1.72
CHRNA1P02708 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CHRNA1P02708 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CHRNA1P02708 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
CHRNA1P02708 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CHRNA1P02708 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.81■■□□□ 1.72
CHRNA1P02708 AC090877.2-201ENST00000558441 1738 ntBASIC25.81■■□□□ 1.72
CHRNA1P02708 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
CHRNA1P02708 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.81■■□□□ 1.72
CHRNA1P02708 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHRNA1P02708 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHRNA1P02708 AC097639.1-201ENST00000565519 1891 ntBASIC25.81■■□□□ 1.72
CHRNA1P02708 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.8■■□□□ 1.72
CHRNA1P02708 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHRNA1P02708 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHRNA1P02708 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHRNA1P02708 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CHRNA1P02708 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
CHRNA1P02708 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CHRNA1P02708 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.79■■□□□ 1.72
CHRNA1P02708 MIR935-201ENST00000401179 91 ntBASIC25.79■■□□□ 1.72
CHRNA1P02708 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.79■■□□□ 1.72
CHRNA1P02708 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.79■■□□□ 1.72
CHRNA1P02708 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
CHRNA1P02708 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CHRNA1P02708 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CHRNA1P02708 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.78■■□□□ 1.72
CHRNA1P02708 AL512631.2-201ENST00000604634 923 ntBASIC25.78■■□□□ 1.72
CHRNA1P02708 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
CHRNA1P02708 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.77■■□□□ 1.72
CHRNA1P02708 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.77■■□□□ 1.72
CHRNA1P02708 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.77■■□□□ 1.72
CHRNA1P02708 AC110285.6-201ENST00000617652 491 ntBASIC25.77■■□□□ 1.72
CHRNA1P02708 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.77■■□□□ 1.72
CHRNA1P02708 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
CHRNA1P02708 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHRNA1P02708 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHRNA1P02708 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHRNA1P02708 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHRNA1P02708 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.76■■□□□ 1.71
CHRNA1P02708 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
CHRNA1P02708 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHRNA1P02708 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHRNA1P02708 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.75■■□□□ 1.71
CHRNA1P02708 SNX5-217ENST00000606557 1087 ntBASIC25.75■■□□□ 1.71
CHRNA1P02708 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHRNA1P02708 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
CHRNA1P02708 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHRNA1P02708 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.74■■□□□ 1.71
CHRNA1P02708 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.74■■□□□ 1.71
CHRNA1P02708 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHRNA1P02708 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.73■■□□□ 1.71
CHRNA1P02708 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CHRNA1P02708 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.73■■□□□ 1.71
CHRNA1P02708 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHRNA1P02708 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHRNA1P02708 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHRNA1P02708 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CHRNA1P02708 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHRNA1P02708 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.72■■□□□ 1.71
CHRNA1P02708 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.72■■□□□ 1.71
CHRNA1P02708 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHRNA1P02708 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.72■■□□□ 1.71
CHRNA1P02708 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms