Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
UBE4BO95155 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.81■■□□□ 1.72
UBE4BO95155 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
UBE4BO95155 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
UBE4BO95155 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.8■■□□□ 1.72
UBE4BO95155 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.8■■□□□ 1.72
UBE4BO95155 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
UBE4BO95155 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
UBE4BO95155 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
UBE4BO95155 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
UBE4BO95155 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.79■■□□□ 1.72
UBE4BO95155 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.79■■□□□ 1.72
UBE4BO95155 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
UBE4BO95155 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
UBE4BO95155 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
UBE4BO95155 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
UBE4BO95155 AC022616.5-201ENST00000518796 181 ntBASIC25.78■■□□□ 1.72
UBE4BO95155 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
UBE4BO95155 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.77■■□□□ 1.72
UBE4BO95155 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.77■■□□□ 1.72
UBE4BO95155 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
UBE4BO95155 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.77■■□□□ 1.72
UBE4BO95155 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.77■■□□□ 1.72
UBE4BO95155 BHLHE23-202ENST00000612929 1109 ntBASIC25.77■■□□□ 1.72
UBE4BO95155 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.77■■□□□ 1.72
UBE4BO95155 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.77■■□□□ 1.72
UBE4BO95155 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.77■■□□□ 1.72
UBE4BO95155 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
UBE4BO95155 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
UBE4BO95155 AL139125.2-201ENST00000623134 1869 ntBASIC25.76■■□□□ 1.71
UBE4BO95155 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
UBE4BO95155 AL033527.3-201ENST00000566366 1196 ntBASIC25.76■■□□□ 1.71
UBE4BO95155 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
UBE4BO95155 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
UBE4BO95155 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
UBE4BO95155 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
UBE4BO95155 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
UBE4BO95155 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
UBE4BO95155 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
UBE4BO95155 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
UBE4BO95155 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.75■■□□□ 1.71
UBE4BO95155 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
UBE4BO95155 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
UBE4BO95155 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
UBE4BO95155 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.74■■□□□ 1.71
UBE4BO95155 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
UBE4BO95155 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.74■■□□□ 1.71
UBE4BO95155 AC011551.1-201ENST00000614101 683 ntBASIC25.74■■□□□ 1.71
UBE4BO95155 AC090877.2-201ENST00000558441 1738 ntBASIC25.74■■□□□ 1.71
UBE4BO95155 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
UBE4BO95155 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.74■■□□□ 1.71
UBE4BO95155 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
UBE4BO95155 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
UBE4BO95155 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
UBE4BO95155 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.73■■□□□ 1.71
UBE4BO95155 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
UBE4BO95155 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
UBE4BO95155 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.73■■□□□ 1.71
UBE4BO95155 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.73■■□□□ 1.71
UBE4BO95155 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
UBE4BO95155 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
UBE4BO95155 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.72■■□□□ 1.71
UBE4BO95155 PVT1_1.1-201ENST00000615125 194 ntBASIC25.72■■□□□ 1.71
UBE4BO95155 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
UBE4BO95155 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
UBE4BO95155 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
UBE4BO95155 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
UBE4BO95155 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.71■■□□□ 1.71
UBE4BO95155 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.71■■□□□ 1.71
UBE4BO95155 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.7■■□□□ 1.71
UBE4BO95155 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.7■■□□□ 1.71
UBE4BO95155 AC010980.1-201ENST00000587192 1142 ntBASIC25.7■■□□□ 1.71
UBE4BO95155 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.7■■□□□ 1.7
UBE4BO95155 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
UBE4BO95155 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
UBE4BO95155 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
UBE4BO95155 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
UBE4BO95155 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.69■■□□□ 1.7
UBE4BO95155 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.69■■□□□ 1.7
UBE4BO95155 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.69■■□□□ 1.7
UBE4BO95155 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
UBE4BO95155 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.69■■□□□ 1.7
UBE4BO95155 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.68■■□□□ 1.7
UBE4BO95155 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.68■■□□□ 1.7
UBE4BO95155 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
UBE4BO95155 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
UBE4BO95155 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
UBE4BO95155 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.67■■□□□ 1.7
UBE4BO95155 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBE4BO95155 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBE4BO95155 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBE4BO95155 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.67■■□□□ 1.7
UBE4BO95155 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.67■■□□□ 1.7
UBE4BO95155 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBE4BO95155 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.67■■□□□ 1.7
UBE4BO95155 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
UBE4BO95155 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
UBE4BO95155 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.66■■□□□ 1.7
UBE4BO95155 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
UBE4BO95155 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms