Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX30O94993 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.78■■□□□ 1.08
SOX30O94993 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX30O94993 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SOX30O94993 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SOX30O94993 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX30O94993 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX30O94993 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX30O94993 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
SOX30O94993 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SOX30O94993 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX30O94993 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.77■■□□□ 1.08
SOX30O94993 LONRF2P2-201ENST00000439212 571 ntBASIC21.77■■□□□ 1.08
SOX30O94993 AC022616.5-201ENST00000518796 181 ntBASIC21.77■■□□□ 1.08
SOX30O94993 AC074183.2-201ENST00000623112 922 ntBASIC21.77■■□□□ 1.08
SOX30O94993 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX30O94993 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.77■■□□□ 1.07
SOX30O94993 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SOX30O94993 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.76■■□□□ 1.07
SOX30O94993 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX30O94993 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX30O94993 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX30O94993 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX30O94993 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX30O94993 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOX30O94993 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
SOX30O94993 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOX30O94993 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX30O94993 AL139125.2-201ENST00000623134 1869 ntBASIC21.75■■□□□ 1.07
SOX30O94993 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX30O94993 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SOX30O94993 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SOX30O94993 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SOX30O94993 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX30O94993 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX30O94993 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX30O94993 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
SOX30O94993 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
SOX30O94993 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.74■■□□□ 1.07
SOX30O94993 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX30O94993 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX30O94993 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SOX30O94993 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX30O94993 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.74■■□□□ 1.07
SOX30O94993 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX30O94993 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX30O94993 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX30O94993 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX30O94993 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX30O94993 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX30O94993 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX30O94993 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.73■■□□□ 1.07
SOX30O94993 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX30O94993 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX30O94993 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.73■■□□□ 1.07
SOX30O94993 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX30O94993 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SOX30O94993 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.72■■□□□ 1.07
SOX30O94993 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SOX30O94993 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX30O94993 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX30O94993 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.72■■□□□ 1.07
SOX30O94993 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX30O94993 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.72■■□□□ 1.07
SOX30O94993 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX30O94993 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX30O94993 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.71■■□□□ 1.07
SOX30O94993 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX30O94993 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX30O94993 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX30O94993 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX30O94993 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX30O94993 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.7■■□□□ 1.06
SOX30O94993 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX30O94993 AC139795.1-202ENST00000500444 432 ntBASIC21.7■■□□□ 1.06
SOX30O94993 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SOX30O94993 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.69■■□□□ 1.06
SOX30O94993 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.69■■□□□ 1.06
SOX30O94993 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.69■■□□□ 1.06
SOX30O94993 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.69■■□□□ 1.06
SOX30O94993 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX30O94993 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.69■■□□□ 1.06
SOX30O94993 AC090877.2-201ENST00000558441 1738 ntBASIC21.69■■□□□ 1.06
SOX30O94993 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX30O94993 LINC00543-201ENST00000567234 1845 ntBASIC21.69■■□□□ 1.06
SOX30O94993 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX30O94993 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX30O94993 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX30O94993 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX30O94993 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SOX30O94993 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SOX30O94993 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SOX30O94993 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.68■■□□□ 1.06
SOX30O94993 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX30O94993 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SOX30O94993 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SOX30O94993 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SOX30O94993 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX30O94993 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX30O94993 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms