Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP2O43734 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAF3IP2O43734 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP2O43734 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP2O43734 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP2O43734 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TRAF3IP2O43734 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP2O43734 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP2O43734 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.92■□□□□ 0.94
TRAF3IP2O43734 AC019171.1-201ENST00000601251 1056 ntBASIC20.92■□□□□ 0.94
TRAF3IP2O43734 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAF3IP2O43734 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRAF3IP2O43734 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAF3IP2O43734 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAF3IP2O43734 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP2O43734 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP2O43734 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF3IP2O43734 AL592295.1-201ENST00000400984 884 ntBASIC20.91■□□□□ 0.94
TRAF3IP2O43734 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF3IP2O43734 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAF3IP2O43734 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAF3IP2O43734 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRAF3IP2O43734 AL033527.3-201ENST00000566366 1196 ntBASIC20.91■□□□□ 0.94
TRAF3IP2O43734 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF3IP2O43734 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAF3IP2O43734 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF3IP2O43734 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF3IP2O43734 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF3IP2O43734 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.89■□□□□ 0.93
TRAF3IP2O43734 BHLHE23-202ENST00000612929 1109 ntBASIC20.89■□□□□ 0.93
TRAF3IP2O43734 AC074183.2-201ENST00000623112 922 ntBASIC20.89■□□□□ 0.93
TRAF3IP2O43734 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF3IP2O43734 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF3IP2O43734 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF3IP2O43734 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.89■□□□□ 0.93
TRAF3IP2O43734 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF3IP2O43734 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF3IP2O43734 AL139125.2-201ENST00000623134 1869 ntBASIC20.88■□□□□ 0.93
TRAF3IP2O43734 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF3IP2O43734 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF3IP2O43734 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TRAF3IP2O43734 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF3IP2O43734 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRAF3IP2O43734 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF3IP2O43734 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF3IP2O43734 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 PVT1_1.1-201ENST00000615125 194 ntBASIC20.87■□□□□ 0.93
TRAF3IP2O43734 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAF3IP2O43734 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 AC010980.1-201ENST00000587192 1142 ntBASIC20.86■□□□□ 0.93
TRAF3IP2O43734 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAF3IP2O43734 AC135731.1-201ENST00000569415 2548 ntBASIC20.85■□□□□ 0.93
TRAF3IP2O43734 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAF3IP2O43734 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAF3IP2O43734 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAF3IP2O43734 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAF3IP2O43734 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAF3IP2O43734 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRAF3IP2O43734 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAF3IP2O43734 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF3IP2O43734 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAF3IP2O43734 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAF3IP2O43734 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF3IP2O43734 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAF3IP2O43734 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms