Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.9■■■□□ 2.38
PCDHGA2Q9Y5H1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.9■■■□□ 2.38
PCDHGA2Q9Y5H1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.85■■■□□ 2.37
PCDHGA2Q9Y5H1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PCDHGA2Q9Y5H1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
PCDHGA2Q9Y5H1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.81■■■□□ 2.36
PCDHGA2Q9Y5H1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PCDHGA2Q9Y5H1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.78■■■□□ 2.36
PCDHGA2Q9Y5H1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PCDHGA2Q9Y5H1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PCDHGA2Q9Y5H1 RARRES2P7-201ENST00000567349 469 ntBASIC29.77■■■□□ 2.36
PCDHGA2Q9Y5H1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PCDHGA2Q9Y5H1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PCDHGA2Q9Y5H1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.65■■■□□ 2.34
PCDHGA2Q9Y5H1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.64■■■□□ 2.34
PCDHGA2Q9Y5H1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
PCDHGA2Q9Y5H1 AC097358.2-201ENST00000607541 1159 ntBASIC29.58■■■□□ 2.33
PCDHGA2Q9Y5H1 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
PCDHGA2Q9Y5H1 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.55■■■□□ 2.32
PCDHGA2Q9Y5H1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.51■■■□□ 2.31
PCDHGA2Q9Y5H1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
PCDHGA2Q9Y5H1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
PCDHGA2Q9Y5H1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDHGA2Q9Y5H1 RPS2P35-201ENST00000443417 897 ntBASIC29.46■■■□□ 2.31
PCDHGA2Q9Y5H1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.45■■■□□ 2.31
PCDHGA2Q9Y5H1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PCDHGA2Q9Y5H1 AC136428.2-201ENST00000563187 214 ntBASIC29.43■■■□□ 2.3
PCDHGA2Q9Y5H1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
PCDHGA2Q9Y5H1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PCDHGA2Q9Y5H1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCDHGA2Q9Y5H1 SETD8P1-201ENST00000623146 1180 ntBASIC29.4■■■□□ 2.3
PCDHGA2Q9Y5H1 SUZ12P1-203ENST00000578195 985 ntBASIC29.38■■■□□ 2.29
PCDHGA2Q9Y5H1 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
PCDHGA2Q9Y5H1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHGA2Q9Y5H1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHGA2Q9Y5H1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHGA2Q9Y5H1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.34■■■□□ 2.29
PCDHGA2Q9Y5H1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.33■■■□□ 2.29
PCDHGA2Q9Y5H1 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
PCDHGA2Q9Y5H1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
PCDHGA2Q9Y5H1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.26■■■□□ 2.27
PCDHGA2Q9Y5H1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCDHGA2Q9Y5H1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHGA2Q9Y5H1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.24■■■□□ 2.27
PCDHGA2Q9Y5H1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHGA2Q9Y5H1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCDHGA2Q9Y5H1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.19■■■□□ 2.26
PCDHGA2Q9Y5H1 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.18■■■□□ 2.26
PCDHGA2Q9Y5H1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHGA2Q9Y5H1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHGA2Q9Y5H1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.16■■■□□ 2.26
PCDHGA2Q9Y5H1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.16■■■□□ 2.26
PCDHGA2Q9Y5H1 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.16■■■□□ 2.26
PCDHGA2Q9Y5H1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.15■■■□□ 2.26
PCDHGA2Q9Y5H1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
PCDHGA2Q9Y5H1 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.12■■■□□ 2.25
PCDHGA2Q9Y5H1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.08■■■□□ 2.25
PCDHGA2Q9Y5H1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PCDHGA2Q9Y5H1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
PCDHGA2Q9Y5H1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.07■■■□□ 2.24
PCDHGA2Q9Y5H1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.05■■■□□ 2.24
PCDHGA2Q9Y5H1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
PCDHGA2Q9Y5H1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
PCDHGA2Q9Y5H1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCDHGA2Q9Y5H1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
PCDHGA2Q9Y5H1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PCDHGA2Q9Y5H1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PCDHGA2Q9Y5H1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCDHGA2Q9Y5H1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.97■■■□□ 2.23
PCDHGA2Q9Y5H1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.97■■■□□ 2.23
PCDHGA2Q9Y5H1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
PCDHGA2Q9Y5H1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PCDHGA2Q9Y5H1 AL162393.1-201ENST00000437852 946 ntBASIC28.91■■■□□ 2.22
PCDHGA2Q9Y5H1 AP006261.1-201ENST00000584783 668 ntBASIC28.91■■■□□ 2.22
PCDHGA2Q9Y5H1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.85■■■□□ 2.21
PCDHGA2Q9Y5H1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHGA2Q9Y5H1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
PCDHGA2Q9Y5H1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.85■■■□□ 2.21
PCDHGA2Q9Y5H1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PCDHGA2Q9Y5H1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.83■■■□□ 2.21
PCDHGA2Q9Y5H1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
PCDHGA2Q9Y5H1 CAHM-201ENST00000604200 896 ntBASIC28.81■■■□□ 2.2
PCDHGA2Q9Y5H1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.81■■■□□ 2.2
PCDHGA2Q9Y5H1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCDHGA2Q9Y5H1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.8■■■□□ 2.2
PCDHGA2Q9Y5H1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PCDHGA2Q9Y5H1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PCDHGA2Q9Y5H1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PCDHGA2Q9Y5H1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PCDHGA2Q9Y5H1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PCDHGA2Q9Y5H1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.68■■■□□ 2.18
PCDHGA2Q9Y5H1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PCDHGA2Q9Y5H1 AL391121.1-201ENST00000607967 1349 ntBASIC28.67■■■□□ 2.18
PCDHGA2Q9Y5H1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHGA2Q9Y5H1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.66■■■□□ 2.18
PCDHGA2Q9Y5H1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHGA2Q9Y5H1 MIR7108-201ENST00000614319 87 ntBASIC28.66■■■□□ 2.18
PCDHGA2Q9Y5H1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
PCDHGA2Q9Y5H1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
PCDHGA2Q9Y5H1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms