Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SUZ12P1-203ENST00000578195 985 ntBASIC30.73■■■□□ 2.51
LRFN3Q9BTN0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.7■■■□□ 2.51
LRFN3Q9BTN0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
LRFN3Q9BTN0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LRFN3Q9BTN0 AC136428.2-201ENST00000563187 214 ntBASIC30.65■■■□□ 2.5
LRFN3Q9BTN0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.61■■■□□ 2.49
LRFN3Q9BTN0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
LRFN3Q9BTN0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.59■■■□□ 2.49
LRFN3Q9BTN0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
LRFN3Q9BTN0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
LRFN3Q9BTN0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
LRFN3Q9BTN0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LRFN3Q9BTN0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.54■■■□□ 2.48
LRFN3Q9BTN0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
LRFN3Q9BTN0 SETD8P1-201ENST00000623146 1180 ntBASIC30.49■■■□□ 2.47
LRFN3Q9BTN0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LRFN3Q9BTN0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
LRFN3Q9BTN0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.44■■■□□ 2.46
LRFN3Q9BTN0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
LRFN3Q9BTN0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
LRFN3Q9BTN0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.42■■■□□ 2.46
LRFN3Q9BTN0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
LRFN3Q9BTN0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.37■■■□□ 2.45
LRFN3Q9BTN0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
LRFN3Q9BTN0 MIR7108-201ENST00000614319 87 ntBASIC30.35■■■□□ 2.45
LRFN3Q9BTN0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.34■■■□□ 2.45
LRFN3Q9BTN0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.34■■■□□ 2.45
LRFN3Q9BTN0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
LRFN3Q9BTN0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
LRFN3Q9BTN0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.32■■■□□ 2.44
LRFN3Q9BTN0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
LRFN3Q9BTN0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
LRFN3Q9BTN0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.27■■■□□ 2.44
LRFN3Q9BTN0 AL162393.1-201ENST00000437852 946 ntBASIC30.25■■■□□ 2.43
LRFN3Q9BTN0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
LRFN3Q9BTN0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
LRFN3Q9BTN0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.2■■■□□ 2.43
LRFN3Q9BTN0 ABHD17AP4-201ENST00000411545 909 ntBASIC30.18■■■□□ 2.42
LRFN3Q9BTN0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.15■■■□□ 2.42
LRFN3Q9BTN0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.15■■■□□ 2.42
LRFN3Q9BTN0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
LRFN3Q9BTN0 HLA-V-202ENST00000446817 847 ntBASIC30.14■■■□□ 2.42
LRFN3Q9BTN0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
LRFN3Q9BTN0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
LRFN3Q9BTN0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.13■■■□□ 2.41
LRFN3Q9BTN0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.12■■■□□ 2.41
LRFN3Q9BTN0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
LRFN3Q9BTN0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.09■■■□□ 2.41
LRFN3Q9BTN0 AP006261.1-201ENST00000584783 668 ntBASIC30.06■■■□□ 2.4
LRFN3Q9BTN0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
LRFN3Q9BTN0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.03■■■□□ 2.4
LRFN3Q9BTN0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
LRFN3Q9BTN0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
LRFN3Q9BTN0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.99■■■□□ 2.39
LRFN3Q9BTN0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.98■■■□□ 2.39
LRFN3Q9BTN0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
LRFN3Q9BTN0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.95■■■□□ 2.39
LRFN3Q9BTN0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.93■■■□□ 2.38
LRFN3Q9BTN0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
LRFN3Q9BTN0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.9■■■□□ 2.38
LRFN3Q9BTN0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.86■■■□□ 2.37
LRFN3Q9BTN0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
LRFN3Q9BTN0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.85■■■□□ 2.37
LRFN3Q9BTN0 CAHM-201ENST00000604200 896 ntBASIC29.85■■■□□ 2.37
LRFN3Q9BTN0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
LRFN3Q9BTN0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
LRFN3Q9BTN0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
LRFN3Q9BTN0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.81■■■□□ 2.36
LRFN3Q9BTN0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.78■■■□□ 2.36
LRFN3Q9BTN0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LRFN3Q9BTN0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
LRFN3Q9BTN0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.75■■■□□ 2.35
LRFN3Q9BTN0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
LRFN3Q9BTN0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.66■■■□□ 2.34
LRFN3Q9BTN0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.66■■■□□ 2.34
LRFN3Q9BTN0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
LRFN3Q9BTN0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
LRFN3Q9BTN0 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.63■■■□□ 2.33
LRFN3Q9BTN0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
LRFN3Q9BTN0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
LRFN3Q9BTN0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.6■■■□□ 2.33
LRFN3Q9BTN0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.6■■■□□ 2.33
LRFN3Q9BTN0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.59■■■□□ 2.33
LRFN3Q9BTN0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
LRFN3Q9BTN0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.58■■■□□ 2.33
LRFN3Q9BTN0 MIR3665-201ENST00000578708 105 ntBASIC29.57■■■□□ 2.32
LRFN3Q9BTN0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
LRFN3Q9BTN0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LRFN3Q9BTN0 AL391121.1-201ENST00000607967 1349 ntBASIC29.55■■■□□ 2.32
LRFN3Q9BTN0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.54■■■□□ 2.32
LRFN3Q9BTN0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
LRFN3Q9BTN0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
LRFN3Q9BTN0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.54■■■□□ 2.32
LRFN3Q9BTN0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.53■■■□□ 2.32
LRFN3Q9BTN0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
LRFN3Q9BTN0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.49■■■□□ 2.31
LRFN3Q9BTN0 AC087741.3-201ENST00000624270 1347 ntBASIC29.48■■■□□ 2.31
LRFN3Q9BTN0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.48■■■□□ 2.31
LRFN3Q9BTN0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.48■■■□□ 2.31
LRFN3Q9BTN0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms