Protein–RNA interactions for Protein: Q8NHX4

SPATA3, Spermatogenesis-associated protein 3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA3Q8NHX4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SPATA3Q8NHX4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPATA3Q8NHX4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
SPATA3Q8NHX4 SUZ12P1-203ENST00000578195 985 ntBASIC23.69■■□□□ 1.38
SPATA3Q8NHX4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPATA3Q8NHX4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC23.65■■□□□ 1.38
SPATA3Q8NHX4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SPATA3Q8NHX4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SPATA3Q8NHX4 AC136428.2-201ENST00000563187 214 ntBASIC23.61■■□□□ 1.37
SPATA3Q8NHX4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.6■■□□□ 1.37
SPATA3Q8NHX4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPATA3Q8NHX4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPATA3Q8NHX4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SPATA3Q8NHX4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.55■■□□□ 1.36
SPATA3Q8NHX4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPATA3Q8NHX4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SPATA3Q8NHX4 SETD8P1-201ENST00000623146 1180 ntBASIC23.52■■□□□ 1.36
SPATA3Q8NHX4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SPATA3Q8NHX4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SPATA3Q8NHX4 MIR7108-201ENST00000614319 87 ntBASIC23.5■■□□□ 1.35
SPATA3Q8NHX4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.49■■□□□ 1.35
SPATA3Q8NHX4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPATA3Q8NHX4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPATA3Q8NHX4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPATA3Q8NHX4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SPATA3Q8NHX4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.46■■□□□ 1.35
SPATA3Q8NHX4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.43■■□□□ 1.34
SPATA3Q8NHX4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SPATA3Q8NHX4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SPATA3Q8NHX4 ABHD17AP4-201ENST00000411545 909 ntBASIC23.36■■□□□ 1.33
SPATA3Q8NHX4 AL162393.1-201ENST00000437852 946 ntBASIC23.35■■□□□ 1.33
SPATA3Q8NHX4 HLA-V-202ENST00000446817 847 ntBASIC23.35■■□□□ 1.33
SPATA3Q8NHX4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.34■■□□□ 1.33
SPATA3Q8NHX4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPATA3Q8NHX4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.34■■□□□ 1.33
SPATA3Q8NHX4 AP006261.1-201ENST00000584783 668 ntBASIC23.34■■□□□ 1.33
SPATA3Q8NHX4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPATA3Q8NHX4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.32■■□□□ 1.32
SPATA3Q8NHX4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.32■■□□□ 1.32
SPATA3Q8NHX4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPATA3Q8NHX4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SPATA3Q8NHX4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC23.29■■□□□ 1.32
SPATA3Q8NHX4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SPATA3Q8NHX4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.25■■□□□ 1.31
SPATA3Q8NHX4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.25■■□□□ 1.31
SPATA3Q8NHX4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SPATA3Q8NHX4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.22■■□□□ 1.31
SPATA3Q8NHX4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.22■■□□□ 1.31
SPATA3Q8NHX4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPATA3Q8NHX4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPATA3Q8NHX4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPATA3Q8NHX4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.19■■□□□ 1.3
SPATA3Q8NHX4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.18■■□□□ 1.3
SPATA3Q8NHX4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.16■■□□□ 1.3
SPATA3Q8NHX4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
SPATA3Q8NHX4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPATA3Q8NHX4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPATA3Q8NHX4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.12■■□□□ 1.29
SPATA3Q8NHX4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.12■■□□□ 1.29
SPATA3Q8NHX4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.12■■□□□ 1.29
SPATA3Q8NHX4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.1■■□□□ 1.29
SPATA3Q8NHX4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.06■■□□□ 1.28
SPATA3Q8NHX4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.04■■□□□ 1.28
SPATA3Q8NHX4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SPATA3Q8NHX4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.03■■□□□ 1.28
SPATA3Q8NHX4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SPATA3Q8NHX4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPATA3Q8NHX4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.02■■□□□ 1.28
SPATA3Q8NHX4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
SPATA3Q8NHX4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SPATA3Q8NHX4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SPATA3Q8NHX4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SPATA3Q8NHX4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SPATA3Q8NHX4 CAHM-201ENST00000604200 896 ntBASIC22.96■■□□□ 1.27
SPATA3Q8NHX4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SPATA3Q8NHX4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SPATA3Q8NHX4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.93■■□□□ 1.26
SPATA3Q8NHX4 MIR3665-201ENST00000578708 105 ntBASIC22.92■■□□□ 1.26
SPATA3Q8NHX4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.91■■□□□ 1.26
SPATA3Q8NHX4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.91■■□□□ 1.26
SPATA3Q8NHX4 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.91■■□□□ 1.26
SPATA3Q8NHX4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SPATA3Q8NHX4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.88■■□□□ 1.25
SPATA3Q8NHX4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.87■■□□□ 1.25
SPATA3Q8NHX4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.87■■□□□ 1.25
SPATA3Q8NHX4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPATA3Q8NHX4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
SPATA3Q8NHX4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.84■■□□□ 1.25
SPATA3Q8NHX4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
SPATA3Q8NHX4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
SPATA3Q8NHX4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SPATA3Q8NHX4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.82■■□□□ 1.24
SPATA3Q8NHX4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
SPATA3Q8NHX4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.79■■□□□ 1.24
SPATA3Q8NHX4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.79■■□□□ 1.24
SPATA3Q8NHX4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.79■■□□□ 1.24
SPATA3Q8NHX4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.78■■□□□ 1.24
SPATA3Q8NHX4 AL391121.1-201ENST00000607967 1349 ntBASIC22.78■■□□□ 1.24
SPATA3Q8NHX4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SPATA3Q8NHX4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms