Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.34■■■□□ 2.29
TMEFF1Q8IYR6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.34■■■□□ 2.29
TMEFF1Q8IYR6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
TMEFF1Q8IYR6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TMEFF1Q8IYR6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
TMEFF1Q8IYR6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.29■■■□□ 2.28
TMEFF1Q8IYR6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
TMEFF1Q8IYR6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.28■■■□□ 2.28
TMEFF1Q8IYR6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TMEFF1Q8IYR6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.27■■■□□ 2.28
TMEFF1Q8IYR6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
TMEFF1Q8IYR6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.23■■■□□ 2.27
TMEFF1Q8IYR6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.22■■■□□ 2.27
TMEFF1Q8IYR6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.19■■■□□ 2.26
TMEFF1Q8IYR6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
TMEFF1Q8IYR6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
TMEFF1Q8IYR6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.17■■■□□ 2.26
TMEFF1Q8IYR6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.16■■■□□ 2.26
TMEFF1Q8IYR6 RARRES2P7-201ENST00000567349 469 ntBASIC29.13■■■□□ 2.25
TMEFF1Q8IYR6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
TMEFF1Q8IYR6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.09■■■□□ 2.25
TMEFF1Q8IYR6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
TMEFF1Q8IYR6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
TMEFF1Q8IYR6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
TMEFF1Q8IYR6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.05■■■□□ 2.24
TMEFF1Q8IYR6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
TMEFF1Q8IYR6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.96■■■□□ 2.23
TMEFF1Q8IYR6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.95■■■□□ 2.23
TMEFF1Q8IYR6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.95■■■□□ 2.22
TMEFF1Q8IYR6 AC097358.2-201ENST00000607541 1159 ntBASIC28.91■■■□□ 2.22
TMEFF1Q8IYR6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.9■■■□□ 2.22
TMEFF1Q8IYR6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.21
TMEFF1Q8IYR6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.87■■■□□ 2.21
TMEFF1Q8IYR6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.87■■■□□ 2.21
TMEFF1Q8IYR6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
TMEFF1Q8IYR6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TMEFF1Q8IYR6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
TMEFF1Q8IYR6 SETD8P1-201ENST00000623146 1180 ntBASIC28.82■■■□□ 2.2
TMEFF1Q8IYR6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TMEFF1Q8IYR6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TMEFF1Q8IYR6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
TMEFF1Q8IYR6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
TMEFF1Q8IYR6 AC136428.2-201ENST00000563187 214 ntBASIC28.78■■■□□ 2.2
TMEFF1Q8IYR6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.77■■■□□ 2.2
TMEFF1Q8IYR6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.76■■■□□ 2.19
TMEFF1Q8IYR6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.75■■■□□ 2.19
TMEFF1Q8IYR6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
TMEFF1Q8IYR6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TMEFF1Q8IYR6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.67■■■□□ 2.18
TMEFF1Q8IYR6 SUZ12P1-203ENST00000578195 985 ntBASIC28.66■■■□□ 2.18
TMEFF1Q8IYR6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TMEFF1Q8IYR6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TMEFF1Q8IYR6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
TMEFF1Q8IYR6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TMEFF1Q8IYR6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.63■■■□□ 2.17
TMEFF1Q8IYR6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.63■■■□□ 2.17
TMEFF1Q8IYR6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TMEFF1Q8IYR6 RPS2P35-201ENST00000443417 897 ntBASIC28.6■■■□□ 2.17
TMEFF1Q8IYR6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.6■■■□□ 2.17
TMEFF1Q8IYR6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.57■■■□□ 2.16
TMEFF1Q8IYR6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.56■■■□□ 2.16
TMEFF1Q8IYR6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TMEFF1Q8IYR6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TMEFF1Q8IYR6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
TMEFF1Q8IYR6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TMEFF1Q8IYR6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TMEFF1Q8IYR6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.52■■■□□ 2.16
TMEFF1Q8IYR6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TMEFF1Q8IYR6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
TMEFF1Q8IYR6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TMEFF1Q8IYR6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TMEFF1Q8IYR6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.48■■■□□ 2.15
TMEFF1Q8IYR6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.44■■■□□ 2.14
TMEFF1Q8IYR6 AC145285.7-201ENST00000614819 1539 ntBASIC28.41■■■□□ 2.14
TMEFF1Q8IYR6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
TMEFF1Q8IYR6 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.4■■■□□ 2.14
TMEFF1Q8IYR6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.4■■■□□ 2.14
TMEFF1Q8IYR6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
TMEFF1Q8IYR6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
TMEFF1Q8IYR6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TMEFF1Q8IYR6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TMEFF1Q8IYR6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TMEFF1Q8IYR6 CAHM-201ENST00000604200 896 ntBASIC28.32■■■□□ 2.12
TMEFF1Q8IYR6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.29■■■□□ 2.12
TMEFF1Q8IYR6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
TMEFF1Q8IYR6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TMEFF1Q8IYR6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
TMEFF1Q8IYR6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TMEFF1Q8IYR6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TMEFF1Q8IYR6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TMEFF1Q8IYR6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.2■■■□□ 2.1
TMEFF1Q8IYR6 AL162393.1-201ENST00000437852 946 ntBASIC28.19■■■□□ 2.1
TMEFF1Q8IYR6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TMEFF1Q8IYR6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TMEFF1Q8IYR6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TMEFF1Q8IYR6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TMEFF1Q8IYR6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TMEFF1Q8IYR6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TMEFF1Q8IYR6 AL391121.1-201ENST00000607967 1349 ntBASIC28.16■■■□□ 2.1
TMEFF1Q8IYR6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms