Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NFE4Q86UQ8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.37■□□□□ 0.85
NFE4Q86UQ8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NFE4Q86UQ8 AC015813.7-201ENST00000623294 581 ntBASIC20.37■□□□□ 0.85
NFE4Q86UQ8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
NFE4Q86UQ8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NFE4Q86UQ8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFE4Q86UQ8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.32■□□□□ 0.84
NFE4Q86UQ8 AC006077.2-201ENST00000623591 457 ntBASIC20.32■□□□□ 0.84
NFE4Q86UQ8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.32■□□□□ 0.84
NFE4Q86UQ8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFE4Q86UQ8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFE4Q86UQ8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
NFE4Q86UQ8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFE4Q86UQ8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFE4Q86UQ8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NFE4Q86UQ8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NFE4Q86UQ8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NFE4Q86UQ8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.27■□□□□ 0.84
NFE4Q86UQ8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFE4Q86UQ8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NFE4Q86UQ8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFE4Q86UQ8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFE4Q86UQ8 ZNRF2P1-201ENST00000441407 443 ntBASIC20.23■□□□□ 0.83
NFE4Q86UQ8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFE4Q86UQ8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.22■□□□□ 0.83
NFE4Q86UQ8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
NFE4Q86UQ8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.16■□□□□ 0.82
NFE4Q86UQ8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NFE4Q86UQ8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NFE4Q86UQ8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NFE4Q86UQ8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NFE4Q86UQ8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NFE4Q86UQ8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.12■□□□□ 0.81
NFE4Q86UQ8 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NFE4Q86UQ8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NFE4Q86UQ8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NFE4Q86UQ8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NFE4Q86UQ8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NFE4Q86UQ8 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NFE4Q86UQ8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NFE4Q86UQ8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFE4Q86UQ8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NFE4Q86UQ8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NFE4Q86UQ8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20■□□□□ 0.79
NFE4Q86UQ8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NFE4Q86UQ8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NFE4Q86UQ8 AL161658.1-201ENST00000623641 1967 ntBASIC19.98■□□□□ 0.79
NFE4Q86UQ8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NFE4Q86UQ8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NFE4Q86UQ8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NFE4Q86UQ8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NFE4Q86UQ8 AC145285.7-201ENST00000614819 1539 ntBASIC19.93■□□□□ 0.78
NFE4Q86UQ8 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFE4Q86UQ8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFE4Q86UQ8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.9■□□□□ 0.78
NFE4Q86UQ8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFE4Q86UQ8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
NFE4Q86UQ8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NFE4Q86UQ8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NFE4Q86UQ8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NFE4Q86UQ8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFE4Q86UQ8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.86■□□□□ 0.77
NFE4Q86UQ8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NFE4Q86UQ8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NFE4Q86UQ8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFE4Q86UQ8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NFE4Q86UQ8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NFE4Q86UQ8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NFE4Q86UQ8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NFE4Q86UQ8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NFE4Q86UQ8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NFE4Q86UQ8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NFE4Q86UQ8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NFE4Q86UQ8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.81■□□□□ 0.76
NFE4Q86UQ8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NFE4Q86UQ8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NFE4Q86UQ8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.79■□□□□ 0.76
NFE4Q86UQ8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFE4Q86UQ8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFE4Q86UQ8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFE4Q86UQ8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NFE4Q86UQ8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFE4Q86UQ8 AC139426.1-201ENST00000568218 2529 ntBASIC19.75■□□□□ 0.75
NFE4Q86UQ8 AP002365.1-201ENST00000603448 772 ntBASIC19.72■□□□□ 0.75
NFE4Q86UQ8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NFE4Q86UQ8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.7■□□□□ 0.74
NFE4Q86UQ8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NFE4Q86UQ8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFE4Q86UQ8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFE4Q86UQ8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NFE4Q86UQ8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFE4Q86UQ8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.66■□□□□ 0.74
NFE4Q86UQ8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFE4Q86UQ8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.64■□□□□ 0.73
NFE4Q86UQ8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFE4Q86UQ8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFE4Q86UQ8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFE4Q86UQ8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NFE4Q86UQ8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms