Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PSMC3P17980 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.44■■■□□ 2.46
PSMC3P17980 AL031258.1-201ENST00000623562 325 ntBASIC30.43■■■□□ 2.46
PSMC3P17980 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PSMC3P17980 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
PSMC3P17980 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
PSMC3P17980 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
PSMC3P17980 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PSMC3P17980 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.28■■■□□ 2.44
PSMC3P17980 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.27■■■□□ 2.44
PSMC3P17980 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.27■■■□□ 2.44
PSMC3P17980 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
PSMC3P17980 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PSMC3P17980 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PSMC3P17980 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
PSMC3P17980 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PSMC3P17980 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.19■■■□□ 2.42
PSMC3P17980 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.19■■■□□ 2.42
PSMC3P17980 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.18■■■□□ 2.42
PSMC3P17980 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PSMC3P17980 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PSMC3P17980 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PSMC3P17980 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.05■■■□□ 2.4
PSMC3P17980 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
PSMC3P17980 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
PSMC3P17980 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.03■■■□□ 2.4
PSMC3P17980 RARRES2P7-201ENST00000567349 469 ntBASIC30.01■■■□□ 2.39
PSMC3P17980 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.01■■■□□ 2.39
PSMC3P17980 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
PSMC3P17980 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30■■■□□ 2.39
PSMC3P17980 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.98■■■□□ 2.39
PSMC3P17980 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PSMC3P17980 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.97■■■□□ 2.39
PSMC3P17980 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PSMC3P17980 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
PSMC3P17980 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.95■■■□□ 2.39
PSMC3P17980 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.94■■■□□ 2.38
PSMC3P17980 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
PSMC3P17980 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.91■■■□□ 2.38
PSMC3P17980 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
PSMC3P17980 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
PSMC3P17980 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
PSMC3P17980 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PSMC3P17980 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.86■■■□□ 2.37
PSMC3P17980 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
PSMC3P17980 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.84■■■□□ 2.37
PSMC3P17980 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.81■■■□□ 2.36
PSMC3P17980 AC097358.2-201ENST00000607541 1159 ntBASIC29.77■■■□□ 2.36
PSMC3P17980 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.75■■■□□ 2.35
PSMC3P17980 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.72■■■□□ 2.35
PSMC3P17980 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.72■■■□□ 2.35
PSMC3P17980 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.72■■■□□ 2.35
PSMC3P17980 SETD8P1-201ENST00000623146 1180 ntBASIC29.72■■■□□ 2.35
PSMC3P17980 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
PSMC3P17980 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PSMC3P17980 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PSMC3P17980 AC136428.2-201ENST00000563187 214 ntBASIC29.67■■■□□ 2.34
PSMC3P17980 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PSMC3P17980 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.62■■■□□ 2.33
PSMC3P17980 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PSMC3P17980 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.59■■■□□ 2.33
PSMC3P17980 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.55■■■□□ 2.32
PSMC3P17980 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PSMC3P17980 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PSMC3P17980 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
PSMC3P17980 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.51■■■□□ 2.31
PSMC3P17980 SUZ12P1-203ENST00000578195 985 ntBASIC29.51■■■□□ 2.31
PSMC3P17980 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
PSMC3P17980 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PSMC3P17980 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PSMC3P17980 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.48■■■□□ 2.31
PSMC3P17980 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.48■■■□□ 2.31
PSMC3P17980 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.47■■■□□ 2.31
PSMC3P17980 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
PSMC3P17980 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PSMC3P17980 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PSMC3P17980 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.44■■■□□ 2.3
PSMC3P17980 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PSMC3P17980 AC145285.7-201ENST00000614819 1539 ntBASIC29.41■■■□□ 2.3
PSMC3P17980 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.38■■■□□ 2.29
PSMC3P17980 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PSMC3P17980 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.37■■■□□ 2.29
PSMC3P17980 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
PSMC3P17980 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PSMC3P17980 RPS2P35-201ENST00000443417 897 ntBASIC29.33■■■□□ 2.29
PSMC3P17980 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.3■■■□□ 2.28
PSMC3P17980 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PSMC3P17980 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PSMC3P17980 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PSMC3P17980 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
PSMC3P17980 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PSMC3P17980 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
PSMC3P17980 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PSMC3P17980 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PSMC3P17980 CAHM-201ENST00000604200 896 ntBASIC29.21■■■□□ 2.27
PSMC3P17980 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
PSMC3P17980 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.18■■■□□ 2.26
PSMC3P17980 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PSMC3P17980 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
PSMC3P17980 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms