Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
HOXC6P09630 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC33.53■■■□□ 2.96
HOXC6P09630 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC33.53■■■□□ 2.96
HOXC6P09630 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.52■■■□□ 2.96
HOXC6P09630 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
HOXC6P09630 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC33.51■■■□□ 2.96
HOXC6P09630 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC33.51■■■□□ 2.95
HOXC6P09630 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC33.47■■■□□ 2.95
HOXC6P09630 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC33.45■■■□□ 2.95
HOXC6P09630 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC33.4■■■□□ 2.94
HOXC6P09630 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33.4■■■□□ 2.94
HOXC6P09630 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC33.39■■■□□ 2.94
HOXC6P09630 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC33.36■■■□□ 2.93
HOXC6P09630 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC33.32■■■□□ 2.92
HOXC6P09630 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
HOXC6P09630 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC33.3■■■□□ 2.92
HOXC6P09630 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC33.3■■■□□ 2.92
HOXC6P09630 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.3■■■□□ 2.92
HOXC6P09630 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
HOXC6P09630 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC33.27■■■□□ 2.92
HOXC6P09630 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC33.26■■■□□ 2.91
HOXC6P09630 RARRES2P7-201ENST00000567349 469 ntBASIC33.23■■■□□ 2.91
HOXC6P09630 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
HOXC6P09630 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.19■■■□□ 2.9
HOXC6P09630 EBPL-203ENST00000378270 579 ntTSL 2 BASIC33.16■■■□□ 2.9
HOXC6P09630 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
HOXC6P09630 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC33.09■■■□□ 2.89
HOXC6P09630 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC33.09■■■□□ 2.89
HOXC6P09630 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.89
HOXC6P09630 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC33.06■■■□□ 2.88
HOXC6P09630 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC33.05■■■□□ 2.88
HOXC6P09630 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC33.05■■■□□ 2.88
HOXC6P09630 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
HOXC6P09630 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.04■■■□□ 2.88
HOXC6P09630 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC33■■■□□ 2.87
HOXC6P09630 AC097358.2-201ENST00000607541 1159 ntBASIC33■■■□□ 2.87
HOXC6P09630 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.99■■■□□ 2.87
HOXC6P09630 AC136428.2-201ENST00000563187 214 ntBASIC32.96■■■□□ 2.87
HOXC6P09630 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
HOXC6P09630 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
HOXC6P09630 SETD8P1-201ENST00000623146 1180 ntBASIC32.93■■■□□ 2.86
HOXC6P09630 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
HOXC6P09630 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.89■■■□□ 2.86
HOXC6P09630 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.89■■■□□ 2.86
HOXC6P09630 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.85
HOXC6P09630 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
HOXC6P09630 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.84■■■□□ 2.85
HOXC6P09630 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
HOXC6P09630 SUZ12P1-203ENST00000578195 985 ntBASIC32.82■■■□□ 2.84
HOXC6P09630 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.81■■■□□ 2.84
HOXC6P09630 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
HOXC6P09630 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
HOXC6P09630 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.79■■■□□ 2.84
HOXC6P09630 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.76■■■□□ 2.83
HOXC6P09630 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.75■■■□□ 2.83
HOXC6P09630 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
HOXC6P09630 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
HOXC6P09630 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
HOXC6P09630 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
HOXC6P09630 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
HOXC6P09630 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.68■■■□□ 2.82
HOXC6P09630 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.64■■■□□ 2.82
HOXC6P09630 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.62■■■□□ 2.81
HOXC6P09630 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
HOXC6P09630 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.6■■■□□ 2.81
HOXC6P09630 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.6■■■□□ 2.81
HOXC6P09630 RPS2P35-201ENST00000443417 897 ntBASIC32.59■■■□□ 2.81
HOXC6P09630 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
HOXC6P09630 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.59■■■□□ 2.81
HOXC6P09630 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
HOXC6P09630 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
HOXC6P09630 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
HOXC6P09630 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.53■■■□□ 2.8
HOXC6P09630 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
HOXC6P09630 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
HOXC6P09630 AC145285.7-201ENST00000614819 1539 ntBASIC32.48■■■□□ 2.79
HOXC6P09630 CAHM-201ENST00000604200 896 ntBASIC32.43■■■□□ 2.78
HOXC6P09630 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.42■■■□□ 2.78
HOXC6P09630 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
HOXC6P09630 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
HOXC6P09630 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
HOXC6P09630 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
HOXC6P09630 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
HOXC6P09630 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.31■■■□□ 2.76
HOXC6P09630 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
HOXC6P09630 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
HOXC6P09630 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.28■■■□□ 2.76
HOXC6P09630 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.27■■■□□ 2.76
HOXC6P09630 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
HOXC6P09630 AL391121.1-201ENST00000607967 1349 ntBASIC32.26■■■□□ 2.76
HOXC6P09630 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
HOXC6P09630 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
HOXC6P09630 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.26■■■□□ 2.75
HOXC6P09630 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
HOXC6P09630 AL162393.1-201ENST00000437852 946 ntBASIC32.23■■■□□ 2.75
HOXC6P09630 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
HOXC6P09630 AP006261.1-201ENST00000584783 668 ntBASIC32.22■■■□□ 2.75
HOXC6P09630 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.22■■■□□ 2.75
HOXC6P09630 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
HOXC6P09630 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms