Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLDN1O95832 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CLDN1O95832 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CLDN1O95832 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.23■■□□□ 1.79
CLDN1O95832 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLDN1O95832 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CLDN1O95832 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.22■■□□□ 1.79
CLDN1O95832 RARRES2P7-201ENST00000567349 469 ntBASIC26.16■■□□□ 1.78
CLDN1O95832 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CLDN1O95832 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLDN1O95832 RPS2P35-201ENST00000443417 897 ntBASIC26.06■■□□□ 1.76
CLDN1O95832 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CLDN1O95832 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLDN1O95832 AC097358.2-201ENST00000607541 1159 ntBASIC26.03■■□□□ 1.76
CLDN1O95832 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CLDN1O95832 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLDN1O95832 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.01■■□□□ 1.75
CLDN1O95832 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CLDN1O95832 AC136428.2-201ENST00000563187 214 ntBASIC25.93■■□□□ 1.74
CLDN1O95832 SUZ12P1-203ENST00000578195 985 ntBASIC25.91■■□□□ 1.74
CLDN1O95832 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.88■■□□□ 1.73
CLDN1O95832 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC25.87■■□□□ 1.73
CLDN1O95832 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
CLDN1O95832 SETD8P1-201ENST00000623146 1180 ntBASIC25.84■■□□□ 1.73
CLDN1O95832 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
CLDN1O95832 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC25.83■■□□□ 1.73
CLDN1O95832 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLDN1O95832 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLDN1O95832 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLDN1O95832 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
CLDN1O95832 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CLDN1O95832 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.78■■□□□ 1.72
CLDN1O95832 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CLDN1O95832 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CLDN1O95832 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.75■■□□□ 1.71
CLDN1O95832 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLDN1O95832 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLDN1O95832 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLDN1O95832 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.71■■□□□ 1.71
CLDN1O95832 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.7■■□□□ 1.7
CLDN1O95832 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLDN1O95832 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLDN1O95832 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLDN1O95832 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.64■■□□□ 1.7
CLDN1O95832 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CLDN1O95832 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CLDN1O95832 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.62■■□□□ 1.69
CLDN1O95832 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.61■■□□□ 1.69
CLDN1O95832 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CLDN1O95832 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
CLDN1O95832 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CLDN1O95832 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.59■■□□□ 1.69
CLDN1O95832 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.58■■□□□ 1.69
CLDN1O95832 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.58■■□□□ 1.69
CLDN1O95832 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
CLDN1O95832 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.5■■□□□ 1.67
CLDN1O95832 AL162393.1-201ENST00000437852 946 ntBASIC25.49■■□□□ 1.67
CLDN1O95832 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
CLDN1O95832 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC25.47■■□□□ 1.67
CLDN1O95832 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.47■■□□□ 1.67
CLDN1O95832 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.46■■□□□ 1.67
CLDN1O95832 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CLDN1O95832 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CLDN1O95832 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
CLDN1O95832 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.44■■□□□ 1.66
CLDN1O95832 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CLDN1O95832 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.42■■□□□ 1.66
CLDN1O95832 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CLDN1O95832 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLDN1O95832 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CLDN1O95832 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CLDN1O95832 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.39■■□□□ 1.66
CLDN1O95832 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
CLDN1O95832 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC25.37■■□□□ 1.65
CLDN1O95832 CAHM-201ENST00000604200 896 ntBASIC25.36■■□□□ 1.65
CLDN1O95832 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLDN1O95832 AP006261.1-201ENST00000584783 668 ntBASIC25.32■■□□□ 1.64
CLDN1O95832 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
CLDN1O95832 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CLDN1O95832 MIR7108-201ENST00000614319 87 ntBASIC25.3■■□□□ 1.64
CLDN1O95832 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CLDN1O95832 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLDN1O95832 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLDN1O95832 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CLDN1O95832 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CLDN1O95832 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CLDN1O95832 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.24■■□□□ 1.63
CLDN1O95832 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CLDN1O95832 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.24■■□□□ 1.63
CLDN1O95832 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CLDN1O95832 ABHD17AP4-201ENST00000411545 909 ntBASIC25.23■■□□□ 1.63
CLDN1O95832 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CLDN1O95832 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.21■■□□□ 1.63
CLDN1O95832 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.21■■□□□ 1.63
CLDN1O95832 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CLDN1O95832 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.19■■□□□ 1.62
CLDN1O95832 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CLDN1O95832 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CLDN1O95832 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
CLDN1O95832 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms