Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SH2D1AO60880 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SH2D1AO60880 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.56■■□□□ 1.04
SH2D1AO60880 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.55■■□□□ 1.04
SH2D1AO60880 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.55■■□□□ 1.04
SH2D1AO60880 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.55■■□□□ 1.04
SH2D1AO60880 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH2D1AO60880 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH2D1AO60880 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH2D1AO60880 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH2D1AO60880 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SH2D1AO60880 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SH2D1AO60880 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D1AO60880 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D1AO60880 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D1AO60880 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D1AO60880 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D1AO60880 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SH2D1AO60880 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SH2D1AO60880 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH2D1AO60880 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.37■■□□□ 1.01
SH2D1AO60880 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D1AO60880 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D1AO60880 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D1AO60880 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC21.31■■□□□ 1
SH2D1AO60880 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.3■■□□□ 1
SH2D1AO60880 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH2D1AO60880 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.28■■□□□ 1
SH2D1AO60880 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH2D1AO60880 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SH2D1AO60880 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH2D1AO60880 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SH2D1AO60880 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.26■□□□□ 0.99
SH2D1AO60880 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH2D1AO60880 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SH2D1AO60880 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH2D1AO60880 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH2D1AO60880 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH2D1AO60880 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH2D1AO60880 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.18■□□□□ 0.98
SH2D1AO60880 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D1AO60880 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC21.17■□□□□ 0.98
SH2D1AO60880 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH2D1AO60880 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D1AO60880 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D1AO60880 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SH2D1AO60880 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH2D1AO60880 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D1AO60880 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D1AO60880 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D1AO60880 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH2D1AO60880 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SH2D1AO60880 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D1AO60880 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH2D1AO60880 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH2D1AO60880 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH2D1AO60880 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D1AO60880 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH2D1AO60880 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH2D1AO60880 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.08■□□□□ 0.97
SH2D1AO60880 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SH2D1AO60880 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH2D1AO60880 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH2D1AO60880 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH2D1AO60880 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SH2D1AO60880 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH2D1AO60880 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH2D1AO60880 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.02■□□□□ 0.96
SH2D1AO60880 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D1AO60880 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D1AO60880 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SH2D1AO60880 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SH2D1AO60880 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH2D1AO60880 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SH2D1AO60880 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.98■□□□□ 0.95
SH2D1AO60880 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH2D1AO60880 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH2D1AO60880 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH2D1AO60880 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH2D1AO60880 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.94■□□□□ 0.94
SH2D1AO60880 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.94■□□□□ 0.94
SH2D1AO60880 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH2D1AO60880 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH2D1AO60880 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D1AO60880 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.93■□□□□ 0.94
SH2D1AO60880 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D1AO60880 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SH2D1AO60880 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.91■□□□□ 0.94
SH2D1AO60880 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D1AO60880 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D1AO60880 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH2D1AO60880 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.88■□□□□ 0.93
SH2D1AO60880 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH2D1AO60880 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH2D1AO60880 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH2D1AO60880 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH2D1AO60880 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH2D1AO60880 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH2D1AO60880 AC015813.7-201ENST00000623294 581 ntBASIC20.81■□□□□ 0.92
SH2D1AO60880 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms