Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDH17O14917 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
PCDH17O14917 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDH17O14917 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDH17O14917 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.31■■□□□ 1.96
PCDH17O14917 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDH17O14917 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDH17O14917 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
PCDH17O14917 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.27■■□□□ 1.96
PCDH17O14917 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDH17O14917 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
PCDH17O14917 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDH17O14917 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.22■■□□□ 1.95
PCDH17O14917 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.21■■□□□ 1.95
PCDH17O14917 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDH17O14917 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH17O14917 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
PCDH17O14917 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH17O14917 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.16■■□□□ 1.94
PCDH17O14917 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH17O14917 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDH17O14917 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDH17O14917 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH17O14917 DYNLL1-208ENST00000550178 581 ntBASIC27.13■■□□□ 1.93
PCDH17O14917 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
PCDH17O14917 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
PCDH17O14917 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDH17O14917 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
PCDH17O14917 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PCDH17O14917 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.04■■□□□ 1.92
PCDH17O14917 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDH17O14917 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
PCDH17O14917 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
PCDH17O14917 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH17O14917 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDH17O14917 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDH17O14917 AL031258.1-201ENST00000623562 325 ntBASIC26.96■■□□□ 1.91
PCDH17O14917 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDH17O14917 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDH17O14917 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.94■■□□□ 1.9
PCDH17O14917 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.94■■□□□ 1.9
PCDH17O14917 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.91■■□□□ 1.9
PCDH17O14917 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
PCDH17O14917 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDH17O14917 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDH17O14917 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDH17O14917 AC145285.7-201ENST00000614819 1539 ntBASIC26.86■■□□□ 1.89
PCDH17O14917 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH17O14917 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH17O14917 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH17O14917 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.85■■□□□ 1.89
PCDH17O14917 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.84■■□□□ 1.89
PCDH17O14917 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.84■■□□□ 1.89
PCDH17O14917 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH17O14917 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDH17O14917 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.81■■□□□ 1.88
PCDH17O14917 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDH17O14917 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PCDH17O14917 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH17O14917 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
PCDH17O14917 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDH17O14917 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.76■■□□□ 1.87
PCDH17O14917 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.75■■□□□ 1.87
PCDH17O14917 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
PCDH17O14917 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.73■■□□□ 1.87
PCDH17O14917 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.73■■□□□ 1.87
PCDH17O14917 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDH17O14917 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.71■■□□□ 1.87
PCDH17O14917 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PCDH17O14917 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
PCDH17O14917 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH17O14917 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH17O14917 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH17O14917 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PCDH17O14917 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDH17O14917 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.61■■□□□ 1.85
PCDH17O14917 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.61■■□□□ 1.85
PCDH17O14917 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH17O14917 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH17O14917 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDH17O14917 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDH17O14917 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.54■■□□□ 1.84
PCDH17O14917 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.54■■□□□ 1.84
PCDH17O14917 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.53■■□□□ 1.84
PCDH17O14917 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDH17O14917 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDH17O14917 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
PCDH17O14917 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
PCDH17O14917 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH17O14917 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH17O14917 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PCDH17O14917 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.47■■□□□ 1.83
PCDH17O14917 RARRES2P7-201ENST00000567349 469 ntBASIC26.45■■□□□ 1.82
PCDH17O14917 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDH17O14917 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.44■■□□□ 1.82
PCDH17O14917 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDH17O14917 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.42■■□□□ 1.82
PCDH17O14917 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDH17O14917 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDH17O14917 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms