Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV8-6A0A0B4J262 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.86■□□□□ 0.93
TRAV8-6A0A0B4J262 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV8-6A0A0B4J262 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV8-6A0A0B4J262 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV8-6A0A0B4J262 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV8-6A0A0B4J262 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV8-6A0A0B4J262 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV8-6A0A0B4J262 AC139426.1-201ENST00000568218 2529 ntBASIC20.81■□□□□ 0.92
TRAV8-6A0A0B4J262 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV8-6A0A0B4J262 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAV8-6A0A0B4J262 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV8-6A0A0B4J262 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV8-6A0A0B4J262 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.78■□□□□ 0.92
TRAV8-6A0A0B4J262 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAV8-6A0A0B4J262 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRAV8-6A0A0B4J262 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
TRAV8-6A0A0B4J262 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TRAV8-6A0A0B4J262 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRAV8-6A0A0B4J262 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV8-6A0A0B4J262 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TRAV8-6A0A0B4J262 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAV8-6A0A0B4J262 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV8-6A0A0B4J262 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRAV8-6A0A0B4J262 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV8-6A0A0B4J262 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV8-6A0A0B4J262 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV8-6A0A0B4J262 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAV8-6A0A0B4J262 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV8-6A0A0B4J262 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRAV8-6A0A0B4J262 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAV8-6A0A0B4J262 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAV8-6A0A0B4J262 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAV8-6A0A0B4J262 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV8-6A0A0B4J262 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV8-6A0A0B4J262 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV8-6A0A0B4J262 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV8-6A0A0B4J262 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV8-6A0A0B4J262 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.87
TRAV8-6A0A0B4J262 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV8-6A0A0B4J262 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV8-6A0A0B4J262 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV8-6A0A0B4J262 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV8-6A0A0B4J262 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV8-6A0A0B4J262 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV8-6A0A0B4J262 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAV8-6A0A0B4J262 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAV8-6A0A0B4J262 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAV8-6A0A0B4J262 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV8-6A0A0B4J262 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV8-6A0A0B4J262 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV8-6A0A0B4J262 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRAV8-6A0A0B4J262 AC015813.7-201ENST00000623294 581 ntBASIC20.43■□□□□ 0.86
TRAV8-6A0A0B4J262 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV8-6A0A0B4J262 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV8-6A0A0B4J262 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV8-6A0A0B4J262 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAV8-6A0A0B4J262 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV8-6A0A0B4J262 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV8-6A0A0B4J262 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAV8-6A0A0B4J262 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRAV8-6A0A0B4J262 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV8-6A0A0B4J262 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV8-6A0A0B4J262 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV8-6A0A0B4J262 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV8-6A0A0B4J262 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV8-6A0A0B4J262 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV8-6A0A0B4J262 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TRAV8-6A0A0B4J262 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV8-6A0A0B4J262 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV8-6A0A0B4J262 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV8-6A0A0B4J262 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV8-6A0A0B4J262 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV8-6A0A0B4J262 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV8-6A0A0B4J262 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV8-6A0A0B4J262 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAV8-6A0A0B4J262 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV8-6A0A0B4J262 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRAV8-6A0A0B4J262 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV8-6A0A0B4J262 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV8-6A0A0B4J262 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-6A0A0B4J262 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAV8-6A0A0B4J262 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-6A0A0B4J262 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TRAV8-6A0A0B4J262 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-6A0A0B4J262 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-6A0A0B4J262 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.22■□□□□ 0.83
TRAV8-6A0A0B4J262 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV8-6A0A0B4J262 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TRAV8-6A0A0B4J262 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV8-6A0A0B4J262 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV8-6A0A0B4J262 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV8-6A0A0B4J262 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRAV8-6A0A0B4J262 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAV8-6A0A0B4J262 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAV8-6A0A0B4J262 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TRAV8-6A0A0B4J262 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TRAV8-6A0A0B4J262 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV8-6A0A0B4J262 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TRAV8-6A0A0B4J262 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms