Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV16A0A0A6YYK6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV16A0A0A6YYK6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV16A0A0A6YYK6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
TRAV16A0A0A6YYK6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRAV16A0A0A6YYK6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV16A0A0A6YYK6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV16A0A0A6YYK6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV16A0A0A6YYK6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV16A0A0A6YYK6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV16A0A0A6YYK6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV16A0A0A6YYK6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV16A0A0A6YYK6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV16A0A0A6YYK6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV16A0A0A6YYK6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV16A0A0A6YYK6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRAV16A0A0A6YYK6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV16A0A0A6YYK6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.73■□□□□ 0.75
TRAV16A0A0A6YYK6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV16A0A0A6YYK6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV16A0A0A6YYK6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV16A0A0A6YYK6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV16A0A0A6YYK6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV16A0A0A6YYK6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV16A0A0A6YYK6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRAV16A0A0A6YYK6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV16A0A0A6YYK6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAV16A0A0A6YYK6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV16A0A0A6YYK6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV16A0A0A6YYK6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV16A0A0A6YYK6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV16A0A0A6YYK6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAV16A0A0A6YYK6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV16A0A0A6YYK6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
TRAV16A0A0A6YYK6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAV16A0A0A6YYK6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV16A0A0A6YYK6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV16A0A0A6YYK6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV16A0A0A6YYK6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV16A0A0A6YYK6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
TRAV16A0A0A6YYK6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TRAV16A0A0A6YYK6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV16A0A0A6YYK6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV16A0A0A6YYK6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV16A0A0A6YYK6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRAV16A0A0A6YYK6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV16A0A0A6YYK6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV16A0A0A6YYK6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRAV16A0A0A6YYK6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV16A0A0A6YYK6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV16A0A0A6YYK6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV16A0A0A6YYK6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV16A0A0A6YYK6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRAV16A0A0A6YYK6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRAV16A0A0A6YYK6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV16A0A0A6YYK6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV16A0A0A6YYK6 AL161658.1-201ENST00000623641 1967 ntBASIC19.46■□□□□ 0.71
TRAV16A0A0A6YYK6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV16A0A0A6YYK6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV16A0A0A6YYK6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV16A0A0A6YYK6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRAV16A0A0A6YYK6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV16A0A0A6YYK6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV16A0A0A6YYK6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV16A0A0A6YYK6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV16A0A0A6YYK6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV16A0A0A6YYK6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV16A0A0A6YYK6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV16A0A0A6YYK6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV16A0A0A6YYK6 AC015813.7-201ENST00000623294 581 ntBASIC19.38■□□□□ 0.69
TRAV16A0A0A6YYK6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV16A0A0A6YYK6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV16A0A0A6YYK6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV16A0A0A6YYK6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV16A0A0A6YYK6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRAV16A0A0A6YYK6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV16A0A0A6YYK6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV16A0A0A6YYK6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRAV16A0A0A6YYK6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV16A0A0A6YYK6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV16A0A0A6YYK6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV16A0A0A6YYK6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV16A0A0A6YYK6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV16A0A0A6YYK6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV16A0A0A6YYK6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV16A0A0A6YYK6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV16A0A0A6YYK6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRAV16A0A0A6YYK6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV16A0A0A6YYK6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAV16A0A0A6YYK6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TRAV16A0A0A6YYK6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRAV16A0A0A6YYK6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV16A0A0A6YYK6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV16A0A0A6YYK6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV16A0A0A6YYK6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRAV16A0A0A6YYK6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV16A0A0A6YYK6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV16A0A0A6YYK6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAV16A0A0A6YYK6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV16A0A0A6YYK6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms