Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRAV16A0A0A6YYK6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TRAV16A0A0A6YYK6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.56■■□□□ 1.2
TRAV16A0A0A6YYK6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
TRAV16A0A0A6YYK6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRAV16A0A0A6YYK6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRAV16A0A0A6YYK6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRAV16A0A0A6YYK6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
TRAV16A0A0A6YYK6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRAV16A0A0A6YYK6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.98■■□□□ 1.11
TRAV16A0A0A6YYK6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAV16A0A0A6YYK6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TRAV16A0A0A6YYK6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV16A0A0A6YYK6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.7■■□□□ 1.06
TRAV16A0A0A6YYK6 AL356512.1-201ENST00000607453 1739 ntBASIC21.59■■□□□ 1.05
TRAV16A0A0A6YYK6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TRAV16A0A0A6YYK6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21.57■■□□□ 1.04
TRAV16A0A0A6YYK6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV16A0A0A6YYK6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV16A0A0A6YYK6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
TRAV16A0A0A6YYK6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC21.27■■□□□ 1
TRAV16A0A0A6YYK6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRAV16A0A0A6YYK6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV16A0A0A6YYK6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC21.24■□□□□ 0.99
TRAV16A0A0A6YYK6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRAV16A0A0A6YYK6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV16A0A0A6YYK6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV16A0A0A6YYK6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV16A0A0A6YYK6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV16A0A0A6YYK6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV16A0A0A6YYK6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAV16A0A0A6YYK6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV16A0A0A6YYK6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV16A0A0A6YYK6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
TRAV16A0A0A6YYK6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV16A0A0A6YYK6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV16A0A0A6YYK6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
TRAV16A0A0A6YYK6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRAV16A0A0A6YYK6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV16A0A0A6YYK6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV16A0A0A6YYK6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV16A0A0A6YYK6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV16A0A0A6YYK6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV16A0A0A6YYK6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV16A0A0A6YYK6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV16A0A0A6YYK6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV16A0A0A6YYK6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV16A0A0A6YYK6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV16A0A0A6YYK6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV16A0A0A6YYK6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TRAV16A0A0A6YYK6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV16A0A0A6YYK6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV16A0A0A6YYK6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV16A0A0A6YYK6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV16A0A0A6YYK6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAV16A0A0A6YYK6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRAV16A0A0A6YYK6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV16A0A0A6YYK6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRAV16A0A0A6YYK6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV16A0A0A6YYK6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRAV16A0A0A6YYK6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
TRAV16A0A0A6YYK6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRAV16A0A0A6YYK6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV16A0A0A6YYK6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
TRAV16A0A0A6YYK6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV16A0A0A6YYK6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC20.37■□□□□ 0.85
TRAV16A0A0A6YYK6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC20.36■□□□□ 0.85
TRAV16A0A0A6YYK6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV16A0A0A6YYK6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV16A0A0A6YYK6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAV16A0A0A6YYK6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAV16A0A0A6YYK6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRAV16A0A0A6YYK6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAV16A0A0A6YYK6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV16A0A0A6YYK6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV16A0A0A6YYK6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV16A0A0A6YYK6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAV16A0A0A6YYK6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRAV16A0A0A6YYK6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV16A0A0A6YYK6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
TRAV16A0A0A6YYK6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV16A0A0A6YYK6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV16A0A0A6YYK6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV16A0A0A6YYK6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRAV16A0A0A6YYK6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV16A0A0A6YYK6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV16A0A0A6YYK6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRAV16A0A0A6YYK6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV16A0A0A6YYK6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.01■□□□□ 0.79
TRAV16A0A0A6YYK6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV16A0A0A6YYK6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAV16A0A0A6YYK6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV16A0A0A6YYK6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV16A0A0A6YYK6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
TRAV16A0A0A6YYK6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAV16A0A0A6YYK6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAV16A0A0A6YYK6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV16A0A0A6YYK6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.88■□□□□ 0.77
TRAV16A0A0A6YYK6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV16A0A0A6YYK6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms