Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TRAV6A0A075B6T7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRAV6A0A075B6T7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
TRAV6A0A075B6T7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRAV6A0A075B6T7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC24.81■■□□□ 1.56
TRAV6A0A075B6T7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRAV6A0A075B6T7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRAV6A0A075B6T7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRAV6A0A075B6T7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TRAV6A0A075B6T7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
TRAV6A0A075B6T7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
TRAV6A0A075B6T7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRAV6A0A075B6T7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
TRAV6A0A075B6T7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.72■■□□□ 1.55
TRAV6A0A075B6T7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TRAV6A0A075B6T7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
TRAV6A0A075B6T7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
TRAV6A0A075B6T7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
TRAV6A0A075B6T7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
TRAV6A0A075B6T7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TRAV6A0A075B6T7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRAV6A0A075B6T7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRAV6A0A075B6T7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.58■■□□□ 1.53
TRAV6A0A075B6T7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
TRAV6A0A075B6T7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
TRAV6A0A075B6T7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRAV6A0A075B6T7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.55■■□□□ 1.52
TRAV6A0A075B6T7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
TRAV6A0A075B6T7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRAV6A0A075B6T7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRAV6A0A075B6T7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRAV6A0A075B6T7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRAV6A0A075B6T7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TRAV6A0A075B6T7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRAV6A0A075B6T7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRAV6A0A075B6T7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRAV6A0A075B6T7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.42■■□□□ 1.5
TRAV6A0A075B6T7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRAV6A0A075B6T7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRAV6A0A075B6T7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRAV6A0A075B6T7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRAV6A0A075B6T7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRAV6A0A075B6T7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRAV6A0A075B6T7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRAV6A0A075B6T7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
TRAV6A0A075B6T7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRAV6A0A075B6T7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRAV6A0A075B6T7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRAV6A0A075B6T7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRAV6A0A075B6T7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRAV6A0A075B6T7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRAV6A0A075B6T7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TRAV6A0A075B6T7 AC145285.7-201ENST00000614819 1539 ntBASIC24.32■■□□□ 1.48
TRAV6A0A075B6T7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
TRAV6A0A075B6T7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRAV6A0A075B6T7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRAV6A0A075B6T7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRAV6A0A075B6T7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.27■■□□□ 1.48
TRAV6A0A075B6T7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRAV6A0A075B6T7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRAV6A0A075B6T7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRAV6A0A075B6T7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRAV6A0A075B6T7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRAV6A0A075B6T7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRAV6A0A075B6T7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRAV6A0A075B6T7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRAV6A0A075B6T7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRAV6A0A075B6T7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRAV6A0A075B6T7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRAV6A0A075B6T7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRAV6A0A075B6T7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRAV6A0A075B6T7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRAV6A0A075B6T7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRAV6A0A075B6T7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC24.11■■□□□ 1.45
TRAV6A0A075B6T7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.1■■□□□ 1.45
TRAV6A0A075B6T7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC24.09■■□□□ 1.45
TRAV6A0A075B6T7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC24.09■■□□□ 1.45
TRAV6A0A075B6T7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRAV6A0A075B6T7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRAV6A0A075B6T7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
TRAV6A0A075B6T7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRAV6A0A075B6T7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.05■■□□□ 1.44
TRAV6A0A075B6T7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRAV6A0A075B6T7 ABCB10P1-201ENST00000614297 2181 ntBASIC24.05■■□□□ 1.44
TRAV6A0A075B6T7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
TRAV6A0A075B6T7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRAV6A0A075B6T7 AL161658.1-201ENST00000623641 1967 ntBASIC24.03■■□□□ 1.44
TRAV6A0A075B6T7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRAV6A0A075B6T7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TRAV6A0A075B6T7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
TRAV6A0A075B6T7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TRAV6A0A075B6T7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRAV6A0A075B6T7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRAV6A0A075B6T7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.98■■□□□ 1.43
TRAV6A0A075B6T7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRAV6A0A075B6T7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRAV6A0A075B6T7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.96■■□□□ 1.43
TRAV6A0A075B6T7 ABCB10P3-201ENST00000561950 2166 ntBASIC23.96■■□□□ 1.43
TRAV6A0A075B6T7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRAV6A0A075B6T7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms