Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT2P35908 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT2P35908 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT2P35908 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.32■□□□□ 0.52
KRT2P35908 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT2P35908 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT2P35908 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT2P35908 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT2P35908 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT2P35908 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KRT2P35908 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT2P35908 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT2P35908 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
KRT2P35908 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KRT2P35908 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.31■□□□□ 0.52
KRT2P35908 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
KRT2P35908 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT2P35908 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 AZGP1P1-201ENST00000411909 902 ntBASIC18.31■□□□□ 0.52
KRT2P35908 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT2P35908 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT2P35908 AL079307.3-201ENST00000556114 283 ntBASIC18.31■□□□□ 0.52
KRT2P35908 MIR4313-201ENST00000580760 101 ntBASIC18.31■□□□□ 0.52
KRT2P35908 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT2P35908 AC006538.3-201ENST00000612495 578 ntBASIC18.31■□□□□ 0.52
KRT2P35908 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
KRT2P35908 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
KRT2P35908 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.31■□□□□ 0.52
KRT2P35908 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRT2P35908 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT2P35908 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
KRT2P35908 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT2P35908 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT2P35908 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT2P35908 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT2P35908 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT2P35908 TUBB3P1-201ENST00000405796 1332 ntBASIC18.3■□□□□ 0.52
KRT2P35908 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
KRT2P35908 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KRT2P35908 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT2P35908 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT2P35908 AC046158.3-201ENST00000624947 2558 ntBASIC18.3■□□□□ 0.52
KRT2P35908 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
KRT2P35908 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT2P35908 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
KRT2P35908 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT2P35908 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT2P35908 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT2P35908 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.3■□□□□ 0.52
KRT2P35908 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.3■□□□□ 0.52
KRT2P35908 AL589739.1-201ENST00000607720 493 ntBASIC18.3■□□□□ 0.52
KRT2P35908 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT2P35908 AC093028.1-201ENST00000622998 982 ntBASIC18.3■□□□□ 0.52
KRT2P35908 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT2P35908 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT2P35908 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT2P35908 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT2P35908 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT2P35908 CICP13-201ENST00000422015 2789 ntBASIC18.3■□□□□ 0.52
KRT2P35908 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
KRT2P35908 CETN4P-206ENST00000642099 2168 ntBASIC18.3■□□□□ 0.52
KRT2P35908 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT2P35908 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT2P35908 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
KRT2P35908 KRT8P12-202ENST00000472924 1397 ntBASIC18.3■□□□□ 0.52
KRT2P35908 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT2P35908 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
KRT2P35908 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT2P35908 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT2P35908 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.29■□□□□ 0.52
KRT2P35908 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT2P35908 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT2P35908 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT2P35908 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT2P35908 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT2P35908 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT2P35908 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.29■□□□□ 0.52
KRT2P35908 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT2P35908 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT2P35908 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT2P35908 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.29■□□□□ 0.52
KRT2P35908 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.29■□□□□ 0.52
KRT2P35908 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT2P35908 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms