Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
RAB4AP20338 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB4AP20338 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 HMGA1P5-201ENST00000412453 271 ntBASIC12.34□□□□□ -0.43
RAB4AP20338 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.34□□□□□ -0.43
RAB4AP20338 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 AC007967.3-201ENST00000434308 558 ntBASIC12.34□□□□□ -0.43
RAB4AP20338 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.34□□□□□ -0.43
RAB4AP20338 RASA4DP-201ENST00000460726 1199 ntBASIC12.34□□□□□ -0.43
RAB4AP20338 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.34□□□□□ -0.43
RAB4AP20338 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.34□□□□□ -0.43
RAB4AP20338 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.34□□□□□ -0.43
RAB4AP20338 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB4AP20338 GCSHP2-201ENST00000560971 527 ntBASIC12.34□□□□□ -0.43
RAB4AP20338 AC142381.4-202ENST00000563973 229 ntBASIC12.34□□□□□ -0.43
RAB4AP20338 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB4AP20338 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB4AP20338 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
RAB4AP20338 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB4AP20338 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 AL049757.1-201ENST00000616842 1596 ntBASIC12.34□□□□□ -0.43
RAB4AP20338 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB4AP20338 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB4AP20338 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB4AP20338 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB4AP20338 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB4AP20338 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.34□□□□□ -0.43
RAB4AP20338 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RAB4AP20338 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.33□□□□□ -0.43
RAB4AP20338 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
RAB4AP20338 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.33□□□□□ -0.43
RAB4AP20338 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
RAB4AP20338 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB4AP20338 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.33□□□□□ -0.44
RAB4AP20338 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RAB4AP20338 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB4AP20338 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB4AP20338 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RAB4AP20338 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
RAB4AP20338 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB4AP20338 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB4AP20338 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB4AP20338 AP003733.1-201ENST00000491725 852 ntBASIC12.33□□□□□ -0.44
RAB4AP20338 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
RAB4AP20338 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB4AP20338 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 STK25P1-201ENST00000585406 838 ntBASIC12.33□□□□□ -0.44
RAB4AP20338 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.33□□□□□ -0.44
RAB4AP20338 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.33□□□□□ -0.44
RAB4AP20338 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
RAB4AP20338 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB4AP20338 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB4AP20338 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB4AP20338 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms